2joe
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==NMR Structure of E. Coli YehR Protein. Northeast Structural Genomics Target ER538.== | ==NMR Structure of E. Coli YehR Protein. Northeast Structural Genomics Target ER538.== | ||
<StructureSection load='2joe' size='340' side='right' caption='[[2joe]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | <StructureSection load='2joe' size='340' side='right' caption='[[2joe]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | ||
| Line 4: | Line 5: | ||
<table><tr><td colspan='2'>[[2joe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JOE FirstGlance]. <br> | <table><tr><td colspan='2'>[[2joe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JOE FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yehR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yehR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2joe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2joe OCA], [http://pdbe.org/2joe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2joe RCSB], [http://www.ebi.ac.uk/pdbsum/2joe PDBsum], [http://www.topsan.org/Proteins/NESGC/2joe TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2joe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2joe OCA], [http://pdbe.org/2joe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2joe RCSB], [http://www.ebi.ac.uk/pdbsum/2joe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2joe ProSAT], [http://www.topsan.org/Proteins/NESGC/2joe TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 10: | Line 11: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jo/2joe_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jo/2joe_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2joe ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
Revision as of 06:50, 11 July 2018
NMR Structure of E. Coli YehR Protein. Northeast Structural Genomics Target ER538.
| |||||||||||
Categories: Bacillus coli migula 1895 | Acton, T B | Baran, M C | Chen, C X | Cort, J R | Cunningham, K | Ding, K | Jiang, M | Kennedy, M A | Liu, J | Ma, L | Montelione, G T | Structural genomic | Ramelot, T A | Rost, B | Swapna, G V.T | Xiao, R | Alpha + beta sandwich | Nesg | PSI, Protein structure initiative | Six antiparallel beta strand | Unknown function
