2jkd
From Proteopedia
(Difference between revisions)
												
			
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| - | == | + | |
| + | ==Structure of the yeast Pml1 splicing factor and its integration into the RES complex== | ||
| <StructureSection load='2jkd' size='340' side='right' caption='[[2jkd]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='2jkd' size='340' side='right' caption='[[2jkd]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
| == Structural highlights == | == Structural highlights == | ||
| <table><tr><td colspan='2'>[[2jkd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JKD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JKD FirstGlance]. <br> | <table><tr><td colspan='2'>[[2jkd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JKD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JKD FirstGlance]. <br> | ||
| </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jkd OCA], [http://pdbe.org/2jkd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jkd RCSB], [http://www.ebi.ac.uk/pdbsum/2jkd PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jkd OCA], [http://pdbe.org/2jkd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jkd RCSB], [http://www.ebi.ac.uk/pdbsum/2jkd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2jkd ProSAT]</span></td></tr> | 
| </table> | </table> | ||
| == Evolutionary Conservation == | == Evolutionary Conservation == | ||
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| Check<jmol> | Check<jmol> | ||
|   <jmolCheckbox> |   <jmolCheckbox> | ||
| - |     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jk/2jkd_consurf.spt"</scriptWhenChecked> | + |     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jk/2jkd_consurf.spt"</scriptWhenChecked> | 
|     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
|     <text>to colour the structure by Evolutionary Conservation</text> |     <text>to colour the structure by Evolutionary Conservation</text> | ||
|   </jmolCheckbox> |   </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jkd ConSurf]. | 
| <div style="clear:both"></div> | <div style="clear:both"></div> | ||
| <div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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| [[Category: Quevillon-Cheruel, S]] | [[Category: Quevillon-Cheruel, S]] | ||
| [[Category: Seraphin, B]] | [[Category: Seraphin, B]] | ||
| - | [[Category: Tilbeurgh, H  | + | [[Category: Tilbeurgh, H van]] | 
| [[Category: Gene regulation]] | [[Category: Gene regulation]] | ||
| [[Category: Mrna processing]] | [[Category: Mrna processing]] | ||
Revision as of 07:22, 11 July 2018
Structure of the yeast Pml1 splicing factor and its integration into the RES complex
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