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2k4k
From Proteopedia
(Difference between revisions)
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==Solution structure of GSP13 from Bacillus subtilis== | ==Solution structure of GSP13 from Bacillus subtilis== | ||
<StructureSection load='2k4k' size='340' side='right' caption='[[2k4k]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | <StructureSection load='2k4k' size='340' side='right' caption='[[2k4k]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2k4k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/" | + | <table><tr><td colspan='2'>[[2k4k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4K FirstGlance]. <br> |
| - | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yugI, BSU31390 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 " | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yugI, BSU31390 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4k OCA], [http://pdbe.org/2k4k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k4k RCSB], [http://www.ebi.ac.uk/pdbsum/2k4k PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4k OCA], [http://pdbe.org/2k4k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k4k RCSB], [http://www.ebi.ac.uk/pdbsum/2k4k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4k ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/2k4k_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/2k4k_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k4k ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Vibrio subtilis ehrenberg 1835]] |
[[Category: Hu, J]] | [[Category: Hu, J]] | ||
[[Category: Jin, C]] | [[Category: Jin, C]] | ||
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[[Category: Yu, B]] | [[Category: Yu, B]] | ||
[[Category: Yu, W]] | [[Category: Yu, W]] | ||
| + | [[Category: Cytoplasm]] | ||
[[Category: Rna binding protein]] | [[Category: Rna binding protein]] | ||
[[Category: S1]] | [[Category: S1]] | ||
[[Category: Stress response]] | [[Category: Stress response]] | ||
Revision as of 10:15, 18 July 2018
Solution structure of GSP13 from Bacillus subtilis
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Categories: Vibrio subtilis ehrenberg 1835 | Hu, J | Jin, C | Xia, B | Yu, B | Yu, W | Cytoplasm | Rna binding protein | S1 | Stress response
