This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2khm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
 +
==Structure of the C-terminal non-repetitive domain of the spider dragline silk protein ADF-3==
==Structure of the C-terminal non-repetitive domain of the spider dragline silk protein ADF-3==
<StructureSection load='2khm' size='340' side='right' caption='[[2khm]], [[NMR_Ensembles_of_Models | 21 NMR models]]' scene=''>
<StructureSection load='2khm' size='340' side='right' caption='[[2khm]], [[NMR_Ensembles_of_Models | 21 NMR models]]' scene=''>
Line 4: Line 5:
<table><tr><td colspan='2'>[[2khm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aradi Aradi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KHM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KHM FirstGlance]. <br>
<table><tr><td colspan='2'>[[2khm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aradi Aradi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KHM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KHM FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ADF-3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=45920 ARADI])</td></tr>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ADF-3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=45920 ARADI])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2khm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2khm OCA], [http://pdbe.org/2khm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2khm RCSB], [http://www.ebi.ac.uk/pdbsum/2khm PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2khm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2khm OCA], [http://pdbe.org/2khm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2khm RCSB], [http://www.ebi.ac.uk/pdbsum/2khm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2khm ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 10: Line 11:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/2khm_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/2khm_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2khm ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 26:
</div>
</div>
<div class="pdbe-citations 2khm" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2khm" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Fibroins|Fibroins]]
== References ==
== References ==
<references/>
<references/>

Revision as of 11:03, 18 July 2018

Structure of the C-terminal non-repetitive domain of the spider dragline silk protein ADF-3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools