5z8l
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==crystal structure of Arabidopsis thaliana EBS in complex with an H3K27me3 peptide== | |
- | + | <StructureSection load='5z8l' size='340' side='right' caption='[[5z8l]], [[Resolution|resolution]] 2.00Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[5z8l]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z8L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Z8L FirstGlance]. <br> | |
- | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
- | [[Category: | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5z8l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z8l OCA], [http://pdbe.org/5z8l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5z8l RCSB], [http://www.ebi.ac.uk/pdbsum/5z8l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5z8l ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/EBS_ARATH EBS_ARATH]] Chromatin remodeling factor that binds to methylated histone (e.g. H3K4me2/3) to prevent their acetylation (e.g. H3K9K14Ac), likely by recruiting histone deacetylase (HDAC) complexes, and thus regulating the transcription of target genes (PubMed:25281686). Negative regulator in developmental processes in a gibberellic acid- (GA-) dependent manner, such as germination, flowering induction, and flower organ specification, probably by modulating developmental gene expression (PubMed:11340178, PubMed:25281686). Involved in the chromatin-mediated repression of floral initiation and controls genes regulating flowering (PubMed:25281686). Negatively regulates the expression of the floral integrator FT epigenetically, by preventing high levels of H3 acetylation, thus maintaining an inactive chromatin conformation at FT locus (PubMed:25281686, PubMed:12837946).<ref>PMID:11340178</ref> <ref>PMID:12837946</ref> <ref>PMID:25281686</ref> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Du, J]] | ||
+ | [[Category: Yang, Z]] | ||
+ | [[Category: Bah]] | ||
+ | [[Category: Eb]] | ||
+ | [[Category: Gene regulation]] | ||
+ | [[Category: H3k27me3]] | ||
+ | [[Category: Histone reader]] | ||
+ | [[Category: Phd]] |
Revision as of 07:10, 25 July 2018
crystal structure of Arabidopsis thaliana EBS in complex with an H3K27me3 peptide
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Categories: Du, J | Yang, Z | Bah | Eb | Gene regulation | H3k27me3 | Histone reader | Phd