6gjt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6gjt" [edit=sysop:move=sysop])
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6gjt is ON HOLD until Paper Publication
+
==Chlamydia protein Pgp3 studied at high resolution in a new crystal form==
 +
<StructureSection load='6gjt' size='340' side='right' caption='[[6gjt]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6gjt]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GJT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GJT FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6gjt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gjt OCA], [http://pdbe.org/6gjt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6gjt RCSB], [http://www.ebi.ac.uk/pdbsum/6gjt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6gjt ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The protein Pgp3 is implicated in the sexually transmitted disease chlamydia and comprises an extended complex arrangement of a C-terminal domain (CTD) and an N-terminal domain (NTD) linked by a triple-helix coiled coil (THCC). Here, the X-ray crystal structure of Pgp3 from an LGV1 strain is reported at the highest X-ray diffraction resolution obtained to date for the full protein. The protein was crystallized using a high concentration of potassium bromide, which resulted in a new crystal form with relatively low solvent content that diffracted to a resolution of 1.98 A. The three-dimensional structure of this new crystal form is described and compared with those of other crystal forms, and the potassium bromide binding sites and the relevance to chlamydia isolates from around the globe are described. The crystal packing is apparently driven by the CTDs. Since the threefold axes of the THCC and NTD are not collinear with the threefold axis of a CTD, this naturally leads to disorder in the THCC and the portion of the NTD that does not directly interact with the CTD via crystal packing. The key avenue to resolving these oddities in the crystal structure analysis was a complete new analysis in space group P1 and determining the space group as P212121. This space-group assignment was that originally determined from the diffraction pattern but was perhaps complicated by translational noncrystallographic symmetry. This crystal structure of a three-domain multi-macromolecular complex with two misaligned threefold axes was a unique challenge and has not been encountered before. It is suggested that a specific intermolecular interaction, possibly of functional significance in receptor binding in chlamydia, might allow the design of a new chemotherapeutic agent against chlamydia.
-
Authors:
+
Chlamydia protein Pgp3 studied at high resolution in a new crystal form.,Khurshid S, Govada L, Wills G, McClure MO, Helliwell JR, Chayen NE IUCrJ. 2018 Jun 7;5(Pt 4):439-448. doi: 10.1107/S2052252518007637. eCollection, 2018 Jul 1. PMID:30002845<ref>PMID:30002845</ref>
-
Description:
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 6gjt" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Helliwell, J R]]
 +
[[Category: Cell adhesion]]
 +
[[Category: Chlamydia]]
 +
[[Category: Pgp3]]
 +
[[Category: Receptor binding]]

Revision as of 07:23, 25 July 2018

Chlamydia protein Pgp3 studied at high resolution in a new crystal form

6gjt, resolution 1.98Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools