2oc8

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|PDB= 2oc8 |SIZE=350|CAPTION= <scene name='initialview01'>2oc8</scene>, resolution 2.66&Aring;
|PDB= 2oc8 |SIZE=350|CAPTION= <scene name='initialview01'>2oc8</scene>, resolution 2.66&Aring;
|SITE=
|SITE=
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|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene> and <scene name='pdbligand=HU5:(1R,2S,5S)-N-[(1S)-3-AMINO-1-(CYCLOBUTYLMETHYL)-2,3-DIOXOPROPYL]-3-[(2S)-2-{[(TERT-BUTYLAMINO)CARBONYL]AMINO}-3,3-DIMETHYLBUTANOYL]-6,6-DIMETHYL-3-AZABICYCLO[3.1.0]HEXANE-2-CARBOXAMIDE'>HU5</scene>
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|LIGAND= <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=HU5:(1R,2S,5S)-N-[(1S)-3-AMINO-1-(CYCLOBUTYLMETHYL)-2,3-DIOXOPROPYL]-3-[(2S)-2-{[(TERT-BUTYLAMINO)CARBONYL]AMINO}-3,3-DIMETHYLBUTANOYL]-6,6-DIMETHYL-3-AZABICYCLO[3.1.0]HEXANE-2-CARBOXAMIDE'>HU5</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|ACTIVITY=
|ACTIVITY=
|GENE= NS3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11103 Hepatitis C virus])
|GENE= NS3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11103 Hepatitis C virus])
 +
|DOMAIN=
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|RELATEDENTRY=[[2obo|2OBO]], [[2oc1|2OC1]], [[2oc0|2OC0]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oc8 OCA], [http://www.ebi.ac.uk/pdbsum/2oc8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2oc8 RCSB]</span>
}}
}}
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[[Category: Yarosh-Tomaine, T.]]
[[Category: Yarosh-Tomaine, T.]]
[[Category: Zhang, R.]]
[[Category: Zhang, R.]]
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[[Category: BME]]
 
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[[Category: HU5]]
 
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[[Category: ZN]]
 
[[Category: hcv]]
[[Category: hcv]]
[[Category: hepatitis c virus]]
[[Category: hepatitis c virus]]
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[[Category: viral protein]]
[[Category: viral protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:57:47 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:15:45 2008''

Revision as of 01:15, 31 March 2008

Image:2oc8.jpg


PDB ID 2oc8

Drag the structure with the mouse to rotate
, resolution 2.66Å
Ligands: , ,
Gene: NS3 (Hepatitis C virus)
Related: 2OBO, 2OC1, 2OC0


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Structure of Hepatitis C Viral NS3 protease domain complexed with NS4A peptide and ketoamide SCH503034


Overview

An estimated 1% of the global human population is infected by hepatitis C viruses (HCVs), and there are no broadly effective treatments for the debilitating progression of chronic hepatitis C. A serine protease located within the HCV NS3 protein processes the viral polyprotein at four specific sites and is considered essential for replication. Thus, it emerges as an attractive target for drug design. We report here the 2.5 angstrom resolution X-ray crystal structure of the NS3 protease domain complexed with a synthetic NS4A activator peptide. The protease has a chymotrypsin-like fold and features a tetrahedrally coordinated metal ion distal to the active site. The NS4A peptide intercalates within a beta sheet of the enzyme core.

About this Structure

2OC8 is a Protein complex structure of sequences from Hepatitis c virus. Full crystallographic information is available from OCA.

Reference

Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide., Kim JL, Morgenstern KA, Lin C, Fox T, Dwyer MD, Landro JA, Chambers SP, Markland W, Lepre CA, O'Malley ET, Harbeson SL, Rice CM, Murcko MA, Caron PR, Thomson JA, Cell. 1996 Oct 18;87(2):343-55. PMID:8861917

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