5z9g

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'''Unreleased structure'''
 
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The entry 5z9g is ON HOLD until Paper Publication
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==Crystal structure of KAI2==
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<StructureSection load='5z9g' size='340' side='right' caption='[[5z9g]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5z9g]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z9G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Z9G FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5z9g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z9g OCA], [http://pdbe.org/5z9g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5z9g RCSB], [http://www.ebi.ac.uk/pdbsum/5z9g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5z9g ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/KAI2_ARATH KAI2_ARATH]] Involved in seed germination and seedling development. Essential for plant responses to karrikins, a class of butenolide compounds, structurally similar to strigolactones, released from burning vegetation that stimulate seed germination and enhance seedling photomorphogenesis. KAI2 is not required for strigolactone-mediated responses, but MAX2 is necessary for responses to karrikins and strigolactones.<ref>PMID:20864454</ref> <ref>PMID:22357928</ref> <ref>PMID:23142794</ref> <ref>PMID:23301669</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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A smoke-derived compound, karrikin (KAR), and an endogenous but as yet unidentified KARRIKIN INSENSITIVE2 (KAI2) ligand (KL) have been identified as chemical cues in higher plants that impact on multiple aspects of growth and development. Genetic screening of light-signaling mutants in Arabidopsis thaliana has identified a mutant designated as ply2 (pleiotropic long hypocotyl2) that has pleiotropic light-response defects. In this study, we used positional cloning to identify the molecular lesion of ply2 as a missense mutation of KAI2/HYPOSENSITIVE TO LIGHT, which causes a single amino acid substitution, Ala219Val. Physiological analysis and genetic epistasis analysis with the KL-signaling components MORE AXILLARY GROWTH2 (MAX2) and SUPPRESSOR OF MAX2 1 suggested that the pleiotropic phenotypes of the ply2 mutant can be ascribed to a defect in KL-signaling. Molecular and biochemical analyses revealed that the mutant KAI2ply2 protein is impaired in its ligand-binding activity. In support of this conclusion, X-ray crystallography studies suggested that the KAI2ply2 mutation not only results in a narrowed entrance gate for the ligand but also alters the structural flexibility of the helical lid domains. We discuss the structural implications of the Ala219 residue with regard to ligand-specific binding and signaling of KAI2, together with potential functions of KL-signaling in the context of the light-regulatory network in Arabidopsis thaliana.
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Authors: Kim, K.L., Cha, J.S., Soh, M.S., Cho, H.S.
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A missense allele of KARRIKIN-INSENSITIVE2 impairs ligand-binding and downstream signaling in Arabidopsis thaliana.,Lee I, Kim K, Lee S, Lee S, Hwang E, Shin K, Kim D, Choi J, Choi H, Cha JS, Kim H, Lee RA, Jeong S, Kim J, Kim Y, Nam HG, Park SK, Cho HS, Soh MS J Exp Bot. 2018 Jun 27;69(15):3609-3623. doi: 10.1093/jxb/ery164. PMID:29722815<ref>PMID:29722815</ref>
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Description: Crystal structure of KAI2
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Soh, M.S]]
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<div class="pdbe-citations 5z9g" style="background-color:#fffaf0;"></div>
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[[Category: Kim, K.L]]
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== References ==
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[[Category: Cha, J.S]]
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<references/>
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[[Category: Cho, H.S]]
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__TOC__
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</StructureSection>
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[[Category: Cha, J S]]
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[[Category: Cho, H S]]
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[[Category: Kim, K L]]
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[[Category: Soh, M S]]
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[[Category: Alpha/beta hydrolase]]
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[[Category: Hydrolase]]

Revision as of 06:00, 22 August 2018

Crystal structure of KAI2

5z9g, resolution 1.49Å

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