5ypb

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'''Unreleased structure'''
 
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The entry 5ypb is ON HOLD
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==Zinc binding protein complex with His-peptide==
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<StructureSection load='5ypb' size='340' side='right' caption='[[5ypb]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5ypb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YPB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YPB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ypb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ypb OCA], [http://pdbe.org/5ypb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ypb RCSB], [http://www.ebi.ac.uk/pdbsum/5ypb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ypb ProSAT]</span></td></tr>
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</table>
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== Disease ==
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[[http://www.uniprot.org/uniprot/GRP78_HUMAN GRP78_HUMAN]] Note=Autoantigen in rheumatoid arthritis.<ref>PMID:11160188</ref>
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== Function ==
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[[http://www.uniprot.org/uniprot/GRP78_HUMAN GRP78_HUMAN]] Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.<ref>PMID:2294010</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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p62/SQSTM1 is the key autophagy adapter protein and the hub of multi-cellular signaling. It was recently reported that autophagy and N-end rule pathways are linked via p62. However, the exact recognition mode of degrading substrates and regulation of p62 in the autophagic pathway remain unknown. Here, we present the complex structures between the ZZ-domain of p62 and various type-1 and type-2 N-degrons. The binding mode employed in the interaction of the ZZ-domain with N-degrons differs from that employed by classic N-recognins. It was also determined that oligomerization via the PB1 domain can control functional affinity to the R-BiP substrate. Unexpectedly, we found that self-oligomerization and disassembly of p62 are pH-dependent. These findings broaden our understanding of the functional repertoire of the N-end rule pathway and provide an insight into the regulation of p62 during the autophagic pathway.
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Authors: Kwon, D.H., Kim, L., Song, H.K.
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Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.,Kwon DH, Park OH, Kim L, Jung YO, Park Y, Jeong H, Hyun J, Kim YK, Song HK Nat Commun. 2018 Aug 17;9(1):3291. doi: 10.1038/s41467-018-05825-x. PMID:30120248<ref>PMID:30120248</ref>
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Description: Zinc binding protein complex with His-peptide
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Kwon, D.H]]
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<div class="pdbe-citations 5ypb" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Kim, L]]
[[Category: Kim, L]]
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[[Category: Song, H.K]]
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[[Category: Kwon, D H]]
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[[Category: Song, H K]]
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[[Category: Autophagy]]
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[[Category: Complex]]
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[[Category: N-end rule]]
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[[Category: P62/sqstm1]]
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[[Category: Signaling protein]]
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[[Category: Zz domain]]

Revision as of 07:19, 29 August 2018

Zinc binding protein complex with His-peptide

5ypb, resolution 2.90Å

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