Response regulator
From Proteopedia
(Difference between revisions)
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*DNA-binding response regulator | *DNA-binding response regulator | ||
| - | **[[1kgs]] – TmDrrD – ''Thermotoga maritima''<br/ > | + | **[[1kgs]], [[5u8k]] – TmDrrD – ''Thermotoga maritima''<br/ > |
**[[3nnn]] – TmDrrD receiver domain + BeF3<BR/ > | **[[3nnn]] – TmDrrD receiver domain + BeF3<BR/ > | ||
**[[1p2f]] – TmDrrB<br/ > | **[[1p2f]] – TmDrrB<br/ > | ||
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**[[2gwr]] - MtMtrA – ''Mycobacterium tuberculosis''<br/ > | **[[2gwr]] - MtMtrA – ''Mycobacterium tuberculosis''<br/ > | ||
**[[2hwv]] – EfVicR C terminal – ''Enterococcus faecalis''<br/ > | **[[2hwv]] – EfVicR C terminal – ''Enterococcus faecalis''<br/ > | ||
| + | **[[5hev]] – EfVraR<br /> | ||
**[[2qsj]] – LuxR – ''Silicibbacter pomeroyi''<br/ > | **[[2qsj]] – LuxR – ''Silicibbacter pomeroyi''<br/ > | ||
**[[3cnb]], [[3eqz]] – MerR receiver domain – ''Colwellia psychrerythraea''<br/ > | **[[3cnb]], [[3eqz]] – MerR receiver domain – ''Colwellia psychrerythraea''<br/ > | ||
**[[2rnj]] – SaVraR DBD – ''Staphylococcus aureus'' – NMR<br/ > | **[[2rnj]] – SaVraR DBD – ''Staphylococcus aureus'' – NMR<br/ > | ||
**[[2zxj]] - SaWalR DBD<br/ > | **[[2zxj]] - SaWalR DBD<br/ > | ||
| + | **[[4qwq]] - SaSaeR DNA-binding domain<br /> | ||
| + | **[[4ixa]] – SaeR DNA-binding domain – ''Staphylococcus epidermidis''<br /> | ||
**[[4gvp]] – SaVraR<br /> | **[[4gvp]] – SaVraR<br /> | ||
**[[4if4]] – SaVraR + Mg + BeF3<br /> | **[[4if4]] – SaVraR + Mg + BeF3<br /> | ||
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**[[2y79]] – MtDevs GAF domain (mutant)<br /> | **[[2y79]] – MtDevs GAF domain (mutant)<br /> | ||
**[[3zxo]] - MtDevs ATP-binding domain (mutant)<br /> | **[[3zxo]] - MtDevs ATP-binding domain (mutant)<br /> | ||
| + | **[[5vfa]] – SpRR (mutant)<br /> | ||
*Social motility response regulator | *Social motility response regulator | ||
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**[[3lsg]] - RR C-terminal - ''Fusobacterium nucleatum''<br /> | **[[3lsg]] - RR C-terminal - ''Fusobacterium nucleatum''<br /> | ||
**[[3p01]] - RR - Nostoc<br /> | **[[3p01]] - RR - Nostoc<br /> | ||
| + | **[[6br7]] – RR receiver domain – ''Acinetobacter''<br /> | ||
| + | **[[5u8m]] – SpRR<br /> | ||
| + | **[[5t3y]] – RR - ''Burkholderia multivorans''<br /> | ||
| + | **[[4yn8]] – RR – ''Corynebacterium diphtheriae''<br /> | ||
| + | |||
| + | *Fixj RR | ||
| + | |||
| + | **[[5xso]], [[5xt2]] – RR – ''Bradyrhizobium japonicum''<br /> | ||
*response regulator receiver domain protein | *response regulator receiver domain protein | ||
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**[[3p01]] – RR residues 134-315 – ''Nostoc''<br/ > | **[[3p01]] – RR residues 134-315 – ''Nostoc''<br/ > | ||
**[[3rqi]] – RR + phosphate + Ca + citrate – ''Burkholderia pseudomallei''<br/ > | **[[3rqi]] – RR + phosphate + Ca + citrate – ''Burkholderia pseudomallei''<br/ > | ||
| + | **[[5tqj]], [[5te9]] – RR - ''Burkholderia phymatum''<br /> | ||
| + | **[[5e3j]] – RR Rsta – ''Acinetobacter baumannii''<br /> | ||
| + | **[[4qpj]] – RR Ctra + phosphotransferase – ''Brucella abortus''<br /> | ||
**[[3kto]] – RR - ''Pseudoalteromonas atlantica''<br /> | **[[3kto]] – RR - ''Pseudoalteromonas atlantica''<br /> | ||
**[[3t0y]] – CvRR anti-anti-σ domain + anti-σ factor NEPR<br /> | **[[3t0y]] – CvRR anti-anti-σ domain + anti-σ factor NEPR<br /> | ||
**[[2oqr]] – MtRR Regx3 <br /> | **[[2oqr]] – MtRR Regx3 <br /> | ||
**[[3sy8]] – PaRR Rocr <br /> | **[[3sy8]] – PaRR Rocr <br /> | ||
| - | **[[4ixa]] – RR Saer DNA-binding domain – ''Staphylococcus epidermidis''<br /> | ||
**[[4ml3]], [[4mld]] – SpRR Rec domain (mutant)<br /> | **[[4ml3]], [[4mld]] – SpRR Rec domain (mutant)<br /> | ||
**[[4cbv]] – SpRR (mutant)<br /> | **[[4cbv]] – SpRR (mutant)<br /> | ||
**[[2a9o]], [[2a9p]], [[2a9q]] – SpRR + Mn + BeF3<br /> | **[[2a9o]], [[2a9p]], [[2a9q]] – SpRR + Mn + BeF3<br /> | ||
| + | **[[4zms]] ,[[4zmr]] - SpRR + Mg + BeF3<br /> | ||
**[[2pln]] – HP1043 – ''Helicobacter pylori''<br /> | **[[2pln]] – HP1043 – ''Helicobacter pylori''<br /> | ||
**[[3kht]] – RR – ''Hahella chejuensis'' | **[[3kht]] – RR – ''Hahella chejuensis'' | ||
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**[[3a0r]] – TmTrrA (mutant) + sensor protein<br /> | **[[3a0r]] – TmTrrA (mutant) + sensor protein<br /> | ||
**[[4jas]], [[4jav]] – TmRR (mutant) + histidine kinase<br /> | **[[4jas]], [[4jav]] – TmRR (mutant) + histidine kinase<br /> | ||
| - | + | **[[5uht]] – TmRR + sensor histidine kinase<br /> | |
}} | }} | ||
Revision as of 08:03, 4 September 2018
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3D Structures of response regulator
Updated on 04-September-2018
References
- ↑ Smith JG, Latiolais JA, Guanga GP, Citineni S, Silversmith RE, Bourret RB. Investigation of the role of electrostatic charge in activation of the Escherichia coli response regulator CheY. J Bacteriol. 2003 Nov;185(21):6385-91. PMID:14563873
- ↑ Ladds JC, Muchova K, Blaskovic D, Lewis RJ, Brannigan JA, Wilkinson AJ, Barak I. The response regulator Spo0A from Bacillus subtilis is efficiently phosphorylated in Escherichia coli. FEMS Microbiol Lett. 2003 Jun 27;223(2):153-7. PMID:12829280
- ↑ Hecht GB, Newton A. Identification of a novel response regulator required for the swarmer-to-stalked-cell transition in Caulobacter crescentus. J Bacteriol. 1995 Nov;177(21):6223-9. PMID:7592388
- ↑ Menon S, Wang S. Structure of the Response Regulator PhoP from Mycobacterium tuberculosis Reveals a Dimer through the Receiver Domain. Biochemistry. 2011 Jul 5;50(26):5948-57. Epub 2011 Jun 13. PMID:21634789 doi:10.1021/bi2005575
- ↑ Eraso JM, Kaplan S. Complex regulatory activities associated with the histidine kinase PrrB in expression of photosynthesis genes in Rhodobacter sphaeroides 2.4.1. J Bacteriol. 1996 Dec;178(24):7037-46. PMID:8955382
- ↑ Malone JG, Williams R, Christen M, Jenal U, Spiers AJ, Rainey PB. The structure-function relationship of WspR, a Pseudomonas fluorescens response regulator with a GGDEF output domain. Microbiology. 2007 Apr;153(Pt 4):980-94. PMID:17379708 doi:http://dx.doi.org/10.1099/mic.0.2006/002824-0
- ↑ Allen JF. Redox control of transcription: sensors, response regulators, activators and repressors. FEBS Lett. 1993 Oct 18;332(3):203-7. PMID:8405457
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