2qnv
From Proteopedia
(Difference between revisions)
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==Crystal Structure of the Pregnane X Receptor bound to Colupulone== | ==Crystal Structure of the Pregnane X Receptor bound to Colupulone== | ||
<StructureSection load='2qnv' size='340' side='right' caption='[[2qnv]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='2qnv' size='340' side='right' caption='[[2qnv]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CDZ:3,5-DIHYDROXY-4,6,6-TRIS(3-METHYLBUT-2-EN-1-YL)-2-(2-METHYLPROPANOYL)CYCLOHEXA-2,4-DIEN-1-ONE'>CDZ</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CDZ:3,5-DIHYDROXY-4,6,6-TRIS(3-METHYLBUT-2-EN-1-YL)-2-(2-METHYLPROPANOYL)CYCLOHEXA-2,4-DIEN-1-ONE'>CDZ</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NR1I2, PXR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NR1I2, PXR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qnv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qnv OCA], [http://pdbe.org/2qnv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qnv RCSB], [http://www.ebi.ac.uk/pdbsum/2qnv PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qnv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qnv OCA], [http://pdbe.org/2qnv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qnv RCSB], [http://www.ebi.ac.uk/pdbsum/2qnv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qnv ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qn/2qnv_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qn/2qnv_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qnv ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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[[Category: Teotico, D G]] | [[Category: Teotico, D G]] | ||
[[Category: Alpha helical sandwhich]] | [[Category: Alpha helical sandwhich]] | ||
| + | [[Category: Alternative splicing]] | ||
[[Category: Dna-binding]] | [[Category: Dna-binding]] | ||
[[Category: Metal-binding]] | [[Category: Metal-binding]] | ||
[[Category: Nuclear protein]] | [[Category: Nuclear protein]] | ||
[[Category: Nucleus]] | [[Category: Nucleus]] | ||
| + | [[Category: Polymorphism]] | ||
[[Category: Protein-ligand complex]] | [[Category: Protein-ligand complex]] | ||
[[Category: Receptor]] | [[Category: Receptor]] | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
| + | [[Category: Zinc]] | ||
[[Category: Zinc-finger]] | [[Category: Zinc-finger]] | ||
Revision as of 11:10, 5 September 2018
Crystal Structure of the Pregnane X Receptor bound to Colupulone
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