Symporter

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Line 34: Line 34:
**[[4tpg]], [[4tpj]] – SoSymp + tripeptide<BR />
**[[4tpg]], [[4tpj]] – SoSymp + tripeptide<BR />
-
*Sodium/bile acid symporter
+
*Bile acid/Na+ symporter
**[[4n7w]] – YfSymp – ''Yersinia frederiksenii''<BR />
**[[4n7w]] – YfSymp – ''Yersinia frederiksenii''<BR />
Line 51: Line 51:
**[[1pv7]], [[4oaa]] – EcSymp (mutant) + thiodigalactoside<BR />
**[[1pv7]], [[4oaa]] – EcSymp (mutant) + thiodigalactoside<BR />
-
*Sodium/glucose symporter
+
*Glucose/Na+ symporter
**[[2xq2]] – VpSymp (mutant) – ''Vibrio parahaemolyticus''<BR />
**[[2xq2]] – VpSymp (mutant) – ''Vibrio parahaemolyticus''<BR />
Line 57: Line 57:
**[[4m64]] – Symp (mutant) - ''Salmonella typhimurium''<BR />
**[[4m64]] – Symp (mutant) - ''Salmonella typhimurium''<BR />
-
*Sodium/citrate symporter
+
*Citrate/Na+ symporter
-
**[[5a1s]] – Symp + citrate – ''Salmonella enterica''<BR />
+
**[[5a1s]] – Symp + citrate + Na – ''Salmonella enterica''<BR />
-
**[[5x9r]], [[5xas]], [[5xat]] – KpSymp + citrate – ''Klebsiella pneumoniae''<BR />
+
**[[5x9r]], [[5xas]], [[5xat]] – KpSymp + citrate + Na – ''Klebsiella pneumoniae''<BR />
**[[4bpq]], [[5xar]] – KpSymp <BR />
**[[4bpq]], [[5xar]] – KpSymp <BR />
-
*Sodium/neurotransmitter symporter LeuT
+
*Neurotransmitter/leucine symporter LeuT
-
**[[3qs4]], [[3qs5]], [[3qs6]] – AaSymp (mutant) + tryptophan – ''Aquifex aeolicus''<BR />
+
**[[5jaf]], [[5jae]] – AaSymp - ''Aquifex aeolicus''<BR />
-
**[[3f4i]] – AaSymp + Na <BR />
+
**[[5jag]] – AaSymp (mutant) <BR />
 +
**[[3gjd]] – AaSymp + Na <BR />
**[[3f48]] – AaSymp + alaine + Na<BR />
**[[3f48]] – AaSymp + alaine + Na<BR />
 +
**[[3tu0]] – AaSymp (mutant) + alanine + Na <BR />
**[[3f4j]] – AaSymp + glycine + Na<BR />
**[[3f4j]] – AaSymp + glycine + Na<BR />
-
**[[2a65]] – AaSymp + leucine <BR />
+
**[[2a65]], [[3f3e]], [[3usg]], [[3usi]], [[3usj]], [[3usk]] – AaSymp + leucine + Na<BR />
-
**[[2qb4]] – AaSymp + leucine + desipramine<BR />
+
**[[3mpn]], [[3mpq]], [[3gjc]], [[4hmk]], [[4hod]], [[4fxz]] – AaSymp (mutant) + leucine + Na<BR />
-
**[[2qei]] – AaSymp + alaine + clomipramine<BR />
+
**[[3f3a]] – AaSymp + tryptophan + Na <BR />
 +
**[[3qs4]], [[3qs5]], [[3qs6]] – AaSymp (mutant) + tryptophan + Na <BR />
 +
**[[3f3c]] – AaSymp + phenylalanine + Na <BR />
 +
**[[3f3d]], [[3f4i]], [[3usl]], [[3usm]], [[3uso]] – AaSymp + methionine derivative + Na <BR />
 +
**[[4fy0]] – AaSymp (mutant) + methionine + Na <BR />
 +
**[[2qei]] – AaSymp + alaine + clomipramine + Na<BR />
**[[3gwu]] – AaSymp + sertraline + Na<BR />
**[[3gwu]] – AaSymp + sertraline + Na<BR />
-
**[[3gwv]], [[3gww]] – AaSymp + fluoxetine + Na<BR />
+
**[[3gwv]], [[3gww]], [[2qb4]], [[2q6h]], [[2q72]], [[2qju]] – AaSymp + drug + Na<BR />
 +
**[[4mm4]] – AaSymp (mutant) + drug + Na<BR />
 +
**[[3usp]] – AaSymp + glucoside derivative + Na <BR />
 +
**[[3tt1]], [[3tt3]] – AaSymp (mutant) + antibody + Na <BR />
-
*Divalent ion/sodium symporter
+
*Divalent ion/Na+ symporter
**[[5ul7]], [[5ul9]], [[5uld]], [[5ule]], [[4f35]] – Symp + Na – ''Vibrio cholerae''<BR />
**[[5ul7]], [[5ul9]], [[5uld]], [[5ule]], [[4f35]] – Symp + Na – ''Vibrio cholerae''<BR />

Revision as of 17:21, 24 September 2018

Dipeptide:H+ symporter (green) complex with dipeptide (cyan), lipid and phosphate (PDB code 4d2c)

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3D Structures of symporter

Updated on 24-September-2018

References

  1. Dohan O, De la Vieja A, Paroder V, Riedel C, Artani M, Reed M, Ginter CS, Carrasco N. The sodium/iodide Symporter (NIS): characterization, regulation, and medical significance. Endocr Rev. 2003 Feb;24(1):48-77. PMID:12588808 doi:http://dx.doi.org/10.1210/er.2001-0029
  2. Pohlenz J, Refetoff S. Mutations in the sodium/iodide symporter (NIS) gene as a cause for iodide transport defects and congenital hypothyroidism. Biochimie. 1999 May;81(5):469-76. PMID:10403177
  3. Lyons JA, Parker JL, Solcan N, Brinth A, Li D, Shah ST, Caffrey M, Newstead S. Structural basis for polyspecificity in the POT family of proton-coupled oligopeptide transporters. EMBO Rep. 2014 Jun 10. pii: e201338403. PMID:24916388 doi:http://dx.doi.org/10.15252/embr.201338403

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Michal Harel, Alexander Berchansky, Joel L. Sussman

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