Tyrosine kinase
From Proteopedia
(Difference between revisions)
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- | <StructureSection load='' size=' | + | <StructureSection load='' size='350' side='right' scene='48/483859/Cv/1' caption='Human Fyn tyrosine kinase kinase domain with phosphotyrosine in stick model complex with inhibitor staurosporine (PDB code [[2dq7]]).' pspeed='8'> |
__TOC__ | __TOC__ | ||
==Function== | ==Function== | ||
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*Abl1 kinase domain residues 229-512 | *Abl1 kinase domain residues 229-512 | ||
+ | **[[6bl8]] - hTK kinase domain<br /> | ||
**[[2g2h]] - hTK kinase domain (mutant)<br /> | **[[2g2h]] - hTK kinase domain (mutant)<br /> | ||
**[[1opj]], [[1opk]] - mTK kinase domain <br /> | **[[1opj]], [[1opk]] - mTK kinase domain <br /> | ||
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**[[1fpu]], [[1m52]], [[2qoh]], [[3kf4]], [[3kfa]] - mTK kinase domain + inhibitor<br /> | **[[1fpu]], [[1m52]], [[2qoh]], [[3kf4]], [[3kfa]] - mTK kinase domain + inhibitor<br /> | ||
**[[2z60]], [[3dk3]], [[3dk6]], [[3dk7]] - mTK kinase domain (mutant) + inhibitor<br /> | **[[2z60]], [[3dk3]], [[3dk6]], [[3dk7]] - mTK kinase domain (mutant) + inhibitor<br /> | ||
- | **[[1iep]], [[2hzn]], [[3k5v]], [[3ms9]], [[3mss]], [[3oxz]] - mTK kinase domain + cancer drug<br /> | + | **[[1iep]], [[2hzn]], [[3k5v]], [[3ms9]], [[3mss]], [[3oxz]], [[6hd6]] - mTK kinase domain + cancer drug<br /> |
**[[3ik3]], [[3oy3]] - mTK kinase domain (mutant) + cancer drug<br /> | **[[3ik3]], [[3oy3]] - mTK kinase domain (mutant) + cancer drug<br /> | ||
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*'''Anaplastic lymphoma kinase (Alk)''' | *'''Anaplastic lymphoma kinase (Alk)''' | ||
- | **[[ | + | **[[4tt7]] - hTK kinase domain<br /> |
- | + | ||
- | + | ||
- | + | ||
**[[3l9p]], [[3lcs]], [[3lct]], [[2yhv]], [[2yjr]], [[2yjs]], [[4fnw]], [[4fnx]], [[4anl]] - hTK kinase domain (mutant)<br /> | **[[3l9p]], [[3lcs]], [[3lct]], [[2yhv]], [[2yjr]], [[2yjs]], [[4fnw]], [[4fnx]], [[4anl]] - hTK kinase domain (mutant)<br /> | ||
+ | **[[2xb7]], [[2xba]], [[3aox]], [[5imx]], [[5kz0]] - hTK kinase domain + inhibitor<br /> | ||
+ | **[[4dce]], [[4fob]], [[4foc]], [[4fod]], [[4fny]], [[4fnz]], [[4joa]], [[4mkc]], [[4z55]], [[5iug]], [[5iuh]], [[5iui]] - hTK kinase domain (mutant) + inhibitor<br /> | ||
+ | **[[2xp2]], [[5j7h]], [[5fto]], [[5ftq]] - hTK kinase domain + cancer drug<br /> | ||
+ | **[[2yfx]], [[4anq]], [[4ans]], [[5aaa]], [[5aab]], [[5aac]], [[5a9u]], [[5aa8]], [[5aa9]] - hTK kinase domain (mutant) + cancer drug<br /> | ||
*'''Csk tyrosine kinase''' | *'''Csk tyrosine kinase''' | ||
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**[[1y57]] – hTK + inhibitor<br /> | **[[1y57]] – hTK + inhibitor<br /> | ||
**[[4k11]] – hTK (mutant) + inhibitor<br /> | **[[4k11]] – hTK (mutant) + inhibitor<br /> | ||
+ | **[[6f3f]] – mTK + ADP <br /> | ||
*Src tyrosine kinase SH2+SH3+kinase+C terminal domains | *Src tyrosine kinase SH2+SH3+kinase+C terminal domains | ||
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**[[1fbz]] - hTK Lck SH2 domain + inhibitor<br /> | **[[1fbz]] - hTK Lck SH2 domain + inhibitor<br /> | ||
**[[1bhh]] - hTK Lck SH2 domain + T-lymphocyte-specific TK<br /> | **[[1bhh]] - hTK Lck SH2 domain + T-lymphocyte-specific TK<br /> | ||
+ | **[[5mtm]], [[5mtn]] - hTK Lck SH2 domain + monobody<br /> | ||
**[[1lck]] - hTK Lck SH3-SH2 domain (mutant) + phosphopeptide<br /> | **[[1lck]] - hTK Lck SH3-SH2 domain (mutant) + phosphopeptide<br /> | ||
**[[1x27]] - hTK Lck SH3-SH2 domain + peptide<br /> | **[[1x27]] - hTK Lck SH3-SH2 domain + peptide<br /> | ||
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**[[1xbb]] - Syk kinase domain + Gleevec<br /> | **[[1xbb]] - Syk kinase domain + Gleevec<br /> | ||
**[[1xbc]] - Syk kinase domain + staurosporine<br /> | **[[1xbc]] - Syk kinase domain + staurosporine<br /> | ||
- | **[[3emg]], [[3fqe]], [[3fqh]], [[3fqs]], [[3srv]], [[4dfl]], [[4dfn]], [[3vf8]], [[3vf9]], [[3tub]], [[3tuc]], [[3tud]], [[4f4p]], [[4fyn]], [[4fyo]], [[4fz6]], [[4fz7]], [[4gfg]], [[4i0r]], [[4i0s]], [[4i0t]], [[4puz]], [[4pv0]], [[4rx7]], [[4rx8]], [[4rx9]], [[5lma]], [[5lmb]], [[5ghv]], [[4wnm]], [[4xg3]], [[4xg4]], [[4xg6]], [[4xg7]], [[4xg8]], [[4xg9]], [[4rss]], [[4yjv]], [[5c26]], [[5c27]], [[4yjo]], [[4yjp]], [[4yjq]], [[4yjr]], [[4yjs]], [[4yjt]], [[4yju]], [[5tr6]], [[5tt7]], [[5tiu]], [[5t68]] - Syk kinase domain + inhibitor<br /> | + | **[[3emg]], [[3fqe]], [[3fqh]], [[3fqs]], [[3srv]], [[4dfl]], [[4dfn]], [[3vf8]], [[3vf9]], [[3tub]], [[3tuc]], [[3tud]], [[4f4p]], [[4fyn]], [[4fyo]], [[4fz6]], [[4fz7]], [[4gfg]], [[4i0r]], [[4i0s]], [[4i0t]], [[4puz]], [[4pv0]], [[4rx7]], [[4rx8]], [[4rx9]], [[5lma]], [[5lmb]], [[5ghv]], [[4wnm]], [[4xg3]], [[4xg4]], [[4xg6]], [[4xg7]], [[4xg8]], [[4xg9]], [[4rss]], [[4yjv]], [[5c26]], [[5c27]], [[4yjo]], [[4yjp]], [[4yjq]], [[4yjr]], [[4yjs]], [[4yjt]], [[4yju]], [[5tr6]], [[5tt7]], [[5tiu]], [[5t68]], [[5y5t]], [[5y5u]] - Syk kinase domain + inhibitor<br /> |
**[[4px6]] - Syk kinase domain (mutant) + inhibitor<br /> | **[[4px6]] - Syk kinase domain (mutant) + inhibitor<br /> | ||
**[[1csy]], [[1csz]] - Syk SH2 domain + phosphopeptide – NMR<BR /> | **[[1csy]], [[1csz]] - Syk SH2 domain + phosphopeptide – NMR<BR /> | ||
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*Zap complex | *Zap complex | ||
- | **[[2oq1]] - hTK Zap SH2 domain + peptide<br /> | + | **[[2oq1]], [[4xz1]] - hTK Zap SH2 domain + peptide<br /> |
+ | **[[4xz0]] - hTK Zap SH2 domain + inhibitor<br /> | ||
**[[1u59]] - hTK Zap kinase domain + staurosporine | **[[1u59]] - hTK Zap kinase domain + staurosporine | ||
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**[[3fzp]] - hTK Pyk2 kinase domain + ATPγS<br /> | **[[3fzp]] - hTK Pyk2 kinase domain + ATPγS<br /> | ||
- | **[[3fzr]], [[3fzs]], [[3fzt]], [[3h3c]], [[3et7]], [[5to8]] - hTK Pyk2 kinase domain + inhibitor<br /> | + | **[[3fzr]], [[3fzs]], [[3fzt]], [[3h3c]], [[3et7]], [[5to8]], [[5tob]] - hTK Pyk2 kinase domain + inhibitor<br /> |
**[[3gm1]], [[4r32]] - hTK Pyk2 FAT domain + paxillin peptide<br /> | **[[3gm1]], [[4r32]] - hTK Pyk2 FAT domain + paxillin peptide<br /> | ||
**[[4xek]], [[4xev]], [[4xef]] - hTK Pyk2 FAT domain + leupaxin peptide<br /> | **[[4xek]], [[4xev]], [[4xef]] - hTK Pyk2 FAT domain + leupaxin peptide<br /> | ||
**[[4h1j]] - hFAK2 kinase domain + pyrazole inhibitor<br /> | **[[4h1j]] - hFAK2 kinase domain + pyrazole inhibitor<br /> | ||
+ | **[[3h3c]] - hFAK2 kinase domain + pyrimidine inhibitor<br /> | ||
**[[4h1m]] - hFAK2 kinase domain + indole inhibitor<br /> | **[[4h1m]] - hFAK2 kinase domain + indole inhibitor<br /> | ||
**[[3u3f]] – hFAK2 FAT domain (mutant) + paxillin LD2 motif<br /> | **[[3u3f]] – hFAK2 FAT domain (mutant) + paxillin LD2 motif<br /> | ||
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**[[1rja]] - hTK Ptk6 SH2 domain – NMR<br /> | **[[1rja]] - hTK Ptk6 SH2 domain – NMR<br /> | ||
**[[2kgt]] - hTK Ptk6 SH3 domain – NMR<br /> | **[[2kgt]] - hTK Ptk6 SH3 domain – NMR<br /> | ||
- | **[[5d7v]] - hTK | + | **[[5d7v]], [[6cz2]] - hTK Ptk6 kinase domain <br /> |
- | **[[5da3]] - hTK | + | **[[5da3]], [[6cz3]], [[6cz4]] - hTK Ptk6 kinase domain + inhibitor<br /> |
+ | **[[5h2u]] - hTK Ptk6 kinase domain + drug<br /> | ||
*'''Lyn tyrosine kinase''' (Domains: SH3 39-101; SH2 115-229; kinase 239-512) | *'''Lyn tyrosine kinase''' (Domains: SH3 39-101; SH2 115-229; kinase 239-512) |
Revision as of 22:39, 28 September 2018
|
3D structures of tyrosine kinase
Updated on 28-September-2018
- ↑ Hubbard SR, Till JH. Protein tyrosine kinase structure and function. Annu Rev Biochem. 2000;69:373-98. PMID:10966463 doi:http://dx.doi.org/10.1146/annurev.biochem.69.1.373
- ↑ Roskoski R Jr. Src protein-tyrosine kinase structure and regulation. Biochem Biophys Res Commun. 2004 Nov 26;324(4):1155-64. PMID:15504335 doi:http://dx.doi.org/10.1016/j.bbrc.2004.09.171
- ↑ Tolomeo M, Dieli F, Gebbia N, Simoni D. Tyrosine kinase inhibitors for the treatment of chronic myeloid leukemia. Anticancer Agents Med Chem. 2009 Oct;9(8):853-63. PMID:19538165
- ↑ Lengyel E, Sawada K, Salgia R. Tyrosine kinase mutations in human cancer. Curr Mol Med. 2007 Feb;7(1):77-84. PMID:17311534
- ↑ Kinoshita T, Matsubara M, Ishiguro H, Okita K, Tada T. Structure of human Fyn kinase domain complexed with staurosporine. Biochem Biophys Res Commun. 2006 Aug 4;346(3):840-4. Epub 2006 Jun 13. PMID:16782058 doi:10.1016/j.bbrc.2006.05.212
- ↑ Tou WI, Chen CY. Traditional Chinese medicine as dual guardians against hypertension and cancer? J Biomol Struct Dyn. 2012 Jul;30(3):299-317. Epub 2012 Jun 12. PMID:22694277 doi:10.1080/07391102.2012.680030