2qlk
From Proteopedia
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|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qlk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qlk OCA], [http://www.ebi.ac.uk/pdbsum/2qlk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qlk RCSB]</span> | ||
}} | }} | ||
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==About this Structure== | ==About this Structure== | ||
| - | 2QLK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/ | + | 2QLK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Human_adenovirus_35 Human adenovirus 35]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLK OCA]. |
==Reference== | ==Reference== | ||
Identification of CD46 binding sites within the adenovirus serotype 35 fiber knob., Wang H, Liaw YC, Stone D, Kalyuzhniy O, Amiraslanov I, Tuve S, Verlinde CL, Shayakhmetov D, Stehle T, Roffler S, Lieber A, J Virol. 2007 Dec;81(23):12785-92. Epub 2007 Sep 26. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17898059 17898059] | Identification of CD46 binding sites within the adenovirus serotype 35 fiber knob., Wang H, Liaw YC, Stone D, Kalyuzhniy O, Amiraslanov I, Tuve S, Verlinde CL, Shayakhmetov D, Stehle T, Roffler S, Lieber A, J Virol. 2007 Dec;81(23):12785-92. Epub 2007 Sep 26. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17898059 17898059] | ||
| - | [[Category: Human adenovirus | + | [[Category: Human adenovirus 35]] |
[[Category: Single protein]] | [[Category: Single protein]] | ||
[[Category: Amiraslanov, I.]] | [[Category: Amiraslanov, I.]] | ||
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[[Category: Lieber, A.]] | [[Category: Lieber, A.]] | ||
[[Category: Wang, H.]] | [[Category: Wang, H.]] | ||
| - | [[Category: GOL]] | ||
[[Category: ad35]] | [[Category: ad35]] | ||
[[Category: adenovirus]] | [[Category: adenovirus]] | ||
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[[Category: viral protein]] | [[Category: viral protein]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:50:35 2008'' |
Revision as of 01:50, 31 March 2008
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| , resolution 2.020Å | |||||||
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| Sites: | |||||||
| Ligands: | |||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Adenovirus AD35 fibre head
Overview
Species B human adenoviruses (Ads) are often associated with fatal illnesses in immunocompromised individuals. Recently, species B Ads, most of which use the ubiquitously expressed complement regulatory protein CD46 as a primary attachment receptor, have gained interest for use as gene therapy vectors. In this study, we focused on species B Ad serotype 35 (Ad35), whose trimeric fiber knob domain binds to three CD46 molecules with a KD (equilibrium dissociation constant) of 15.5 nM. To study the Ad35 knob-CD46 interaction, we generated an expression library of Ad35 knobs with random mutations and screened it for CD46 binding. We identified four critical residues (Phe242, Arg279, Ser282, and Glu302) which, when mutated, ablated Ad35 knob binding to CD46 without affecting knob trimerization. The functional importance of the identified residues was validated in surface plasmon resonance and competition binding studies. To model the Ad35 knob-CD46 interaction, we resolved the Ad35 knob structure at 2-A resolution by X-ray crystallography and overlaid it onto the existing structure for Ad11-CD46 interaction. According to our model, all identified Ad35 residues are in regions that interact with CD46, whereby one CD46 molecule binds between two knob monomers. This mode of interaction might have potential consequences for CD46 signaling and intracellular trafficking of Ad35. Our findings are also fundamental for better characterization of species B Ads and design of antiviral drugs, as well as for application of species B Ads as in vivo and in vitro gene transfer vectors.
About this Structure
2QLK is a Single protein structure of sequence from Human adenovirus 35. Full crystallographic information is available from OCA.
Reference
Identification of CD46 binding sites within the adenovirus serotype 35 fiber knob., Wang H, Liaw YC, Stone D, Kalyuzhniy O, Amiraslanov I, Tuve S, Verlinde CL, Shayakhmetov D, Stehle T, Roffler S, Lieber A, J Virol. 2007 Dec;81(23):12785-92. Epub 2007 Sep 26. PMID:17898059
Page seeded by OCA on Mon Mar 31 04:50:35 2008
