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The Ramachandran Principle says that alpha helices, beta strands, and turns are the most likely conformations for a polypeptide chain to adopt, because most other conformations are impossible due to steric collisions between atoms.
The Ramachandran Principle says that alpha helices, beta strands, and turns are the most likely conformations for a polypeptide chain to adopt, because most other conformations are impossible due to steric collisions between atoms.
Check Show Clashes to see where non-bonded atoms are overlapping, and thus in physically impossible positions. (This model simulation allows two atoms to overlap, unlike real atoms.)
Check Show Clashes to see where non-bonded atoms are overlapping, and thus in physically impossible positions. (This model simulation allows two atoms to overlap, unlike real atoms.)

Revision as of 09:40, 18 October 2018

Tutorial: The Ramachandran principle, phi (φ) and psi (ψ) angles in proteins
Eric Martz

The Ramachandran Principle says that alpha helices, beta strands, and turns are the most likely conformations for a polypeptide chain to adopt, because most other conformations are impossible due to steric collisions between atoms. Check Show Clashes to see where non-bonded atoms are overlapping, and thus in physically impossible positions. (This model simulation allows two atoms to overlap, unlike real atoms.)

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Angel Herraez, Eric Martz, Jaime Prilusky

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