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<span style="font-size:2.0em; border:none; margin:0; padding:0.3em; color:#000; font-weight: bold;">Welcome to Proteopedia</span><br>
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<span style="border:none; margin:0; padding:0.3em; color:#000; font-style: italic;"><b>Because life has more than 2D</b>, Proteopedia helps to understand relationships between structure and function. <b>Proteopedia</b> is a free, collaborative 3D-encyclopedia of proteins & other molecules.</span>
<span style="top:+0.2em; font-size:1.2em; padding-right:5px;float:right;">'''''ISSN 2310-6301'''''</span>
<span style="top:+0.2em; font-size:1.2em; padding-right:5px;float:right;">'''''ISSN 2310-6301'''''</span>
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<span style="top:+0.2em; font-size:1.2em; padding-left:5px;">The free, collaborative 3D-encyclopedia of proteins & other molecules<br></span>
 
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Revision as of 12:31, 18 October 2018

Because life has more than 2D, Proteopedia helps to understand relationships between structure and function. Proteopedia is a free, collaborative 3D-encyclopedia of proteins & other molecules. ISSN 2310-6301

Selected Pages Art on Science Journals Education
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Coronavirus COVID-19

A novel coronavirus was found to be the cause of a respiratory illness first detected in Wuhan, China in 2019. 3D structural studies are aiding scientists to understand how the coronavirus infects humans and helping to find new ways to treat the viral spread (video by Fusion Animation).

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Opening a Gate to Human Health

by Alice Clark (PDBe)
In the 1970s, an exciting discovery of a family of medicines was made by the Japanese scientist Satoshi Ōmura. One of these molecules, ivermectin, is shown in this artwork bound in the ligand binding pocket of the Farnesoid X receptor, a protein which helps regulate cholesterol in humans. This structure showed that ivermectin induced transcriptional activity of FXR and could be used to regulate metabolism.

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Structure of Anticancer Ruthenium Half-Sandwich Complex Bound to Glycogen Synthase Kinase 3ß

G Atilla-Gocumen, L Di Costanzo, E Meggers. J Biol Inorg Chem. 2010 doi: 10.1007/s00775-010-0699-x
A crystal structure of an organometallic half-sandwich ruthenium complex bound to glycogen synthase kinase 3ß (GSK-3ß) reveals that the inhibitor binds to the ATP binding site via an induced fit mechanism utilizing several hydrogen bonds and hydrophobic interactions. Importantly, the metal is not involved in any direct interaction with the protein kinase but fulfills a purely structural role.

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Virus Capsid Geometry

The Capsid of a virus is its outer shell or "skin". Viruses have evolved intricate and elegant ways to assemble capsid protein chains into complete, usually spherical capsids, often with icosahedral symmetry. Pictured is an extremely simplified model of a capsid, where a single enlarged atom represents each of the 360 protein chains in the capsid of the Simian Virus 40 (SV40), a member of a group of cancer-causing viruses that has been extensively researched for decades.

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Proteopedia Page Contributors and Editors (what is this?)

Joel L. Sussman, Jaime Prilusky

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