6e7j

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'''Unreleased structure'''
 
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The entry 6e7j is ON HOLD until Paper Publication
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==HIV-1 wild type protease with GRL-042-17A, 3-phenylhexahydro-2h-cyclopenta[d]oxazol-2-one with a bicyclic oxazolidinone scaffold as the P2 ligand==
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<StructureSection load='6e7j' size='340' side='right' caption='[[6e7j]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6e7j]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E7J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6E7J FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HWY:(3aS,5R,6aR)-2-oxo-3-phenylhexahydro-2H-cyclopenta[d][1,3]oxazol-5-yl+[(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate'>HWY</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ien|2ien]], [[6e9a|6e9a]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6e7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e7j OCA], [http://pdbe.org/6e7j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6e7j RCSB], [http://www.ebi.ac.uk/pdbsum/6e7j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6e7j ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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We have designed, synthesized, and evaluated a new class of potent HIV-1 protease inhibitors with novel bicyclic oxazolidinone derivatives as the P2 ligand. We have developed an enantioselective synthesis of these bicyclic oxazolidinones utilizing a key o-iodoxybenzoic acid mediated cyclization. Several inhibitors displayed good to excellent activity toward HIV-1 protease and significant antiviral activity in MT-4 cells. Compound 4k has shown an enzyme Ki of 40 pM and antiviral IC50 of 31 nM. Inhibitors 4k and 4l were evaluated against a panel of highly resistant multidrug-resistant HIV-1 variants, and their fold-changes in antiviral activity were similar to those observed with darunavir. Additionally, two X-ray crystal structures of the related inhibitors 4a and 4e bound to HIV-1 protease were determined at 1.22 and 1.30 A resolution, respectively, and revealed important interactions in the active site that have not yet been explored.
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Authors: Wang, Y.-F., Agniswamy, J., Weber, I.T.
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Design and Synthesis of Potent HIV-1 Protease Inhibitors Containing Bicyclic Oxazolidinone Scaffold as the P2 Ligands: Structure-Activity Studies and Biological and X-ray Structural Studies.,Ghosh AK, Williams JN, Ho RY, Simpson HM, Hattori SI, Hayashi H, Agniswamy J, Wang YF, Weber IT, Mitsuya H J Med Chem. 2018 Oct 24. doi: 10.1021/acs.jmedchem.8b01227. PMID:30354121<ref>PMID:30354121</ref>
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Description: HIV-1 wild type protease with GRL-042-17A, 3-phenylhexahydro-2h-cyclopenta[d]oxazol-2-one with a bicyclic oxazolidinone scaffold as the P2 ligand
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Weber, I.T]]
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<div class="pdbe-citations 6e7j" style="background-color:#fffaf0;"></div>
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[[Category: Wang, Y.-F]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Agniswamy, J]]
[[Category: Agniswamy, J]]
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[[Category: Wang, Y F]]
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[[Category: Weber, I T]]
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[[Category: Antiviral]]
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[[Category: Hiv-1 protease inhibitor of grl-042-17a]]
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[[Category: Hydrolase-hydrolase inhibitor complex]]
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[[Category: Multidrug-resistant]]
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[[Category: Oxazolidinone]]
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[[Category: P2 ligand]]
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[[Category: Viral protein]]

Revision as of 12:14, 7 November 2018

HIV-1 wild type protease with GRL-042-17A, 3-phenylhexahydro-2h-cyclopenta[d]oxazol-2-one with a bicyclic oxazolidinone scaffold as the P2 ligand

6e7j, resolution 1.30Å

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