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6f6j
From Proteopedia
(Difference between revisions)
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/succinate/(3S)-3-hydroxy-L-lysine== | |
| - | + | <StructureSection load='6f6j' size='340' side='right' caption='[[6f6j]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[6f6j]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6F6J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6F6J FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CUW:(2~{S},3~{R})-2,6-bis(azanyl)-3-oxidanyl-hexanoic+acid'>CUW</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr> | |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6f6j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6f6j OCA], [http://pdbe.org/6f6j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6f6j RCSB], [http://www.ebi.ac.uk/pdbsum/6f6j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6f6j ProSAT]</span></td></tr> |
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/LYS3O_CATAD LYS3O_CATAD]] Alpha-ketoglutarate-dependent dioxygenase that in vitro catalyzes the regio- and stereoselective hydroxylation of L-lysine, leading to (3S)-3-hydroxy-L-lysine. Can also use (5R)-5-hydroxy-L-lysine as substrate, but neither D-lysine nor L-ornithine.[REFERENCE:2] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bastard, K]] | ||
| + | [[Category: Isabet, T]] | ||
[[Category: Legrand, P]] | [[Category: Legrand, P]] | ||
| - | [[Category: | + | [[Category: Stura, E A]] |
| - | + | ||
[[Category: Zaparucha, A]] | [[Category: Zaparucha, A]] | ||
| - | [[Category: | + | [[Category: Dioxygenase]] |
| + | [[Category: Enzyme]] | ||
| + | [[Category: Feii alphakg form]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: Oxydoreductase]] | ||
Revision as of 08:18, 14 November 2018
Crystal structure of the Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/succinate/(3S)-3-hydroxy-L-lysine
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