2gge
From Proteopedia
(Difference between revisions)
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<StructureSection load='2gge' size='340' side='right' caption='[[2gge]], [[Resolution|resolution]] 1.89Å' scene=''> | <StructureSection load='2gge' size='340' side='right' caption='[[2gge]], [[Resolution|resolution]] 1.89Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2gge]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/" | + | <table><tr><td colspan='2'>[[2gge]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GGE FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2gdq|2gdq]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2gdq|2gdq]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YITF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 " | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YITF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gge OCA], [http://pdbe.org/2gge PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gge RCSB], [http://www.ebi.ac.uk/pdbsum/2gge PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2gge ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2gge TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gge OCA], [http://pdbe.org/2gge PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gge RCSB], [http://www.ebi.ac.uk/pdbsum/2gge PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2gge ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2gge TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/2gge_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/2gge_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gge ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gge ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Mandelate racemase/muconate lactonizing enzyme|Mandelate racemase/muconate lactonizing enzyme]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Vibrio subtilis ehrenberg 1835]] |
[[Category: Adams, J M]] | [[Category: Adams, J M]] | ||
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
Revision as of 08:25, 14 November 2018
Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A
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Categories: Vibrio subtilis ehrenberg 1835 | Adams, J M | Almo, S C | Atwell, S | Babbitt, P | Bain, K T | Boice, A | Burley, S K | Dickey, M | Emtage, S | Gerlt, J A | Gheyi, T | Groshong, C | Malashkevich, V N | Structural genomic | Ozyurt, S | Pieper, U | Powell, A | Reyes, C | Rooney, I | Rutter, M E | Sali, A | Sauder, J M | Schwinn, K D | Thompson, D A | Wasserman, S R | Enolase | Mandelate racemase/muconate lactonizing enzyme | NYSGXRC, New York SGX Research Center for Structural Genomics | Octamer | PSI, Protein structure initiative | Tim-barrel | Unknown function
