This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3e9x
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal Structure of the Complex of C-lobe of Lactoferrin with Nimesulide at 2.7 A Resolution== | ==Crystal Structure of the Complex of C-lobe of Lactoferrin with Nimesulide at 2.7 A Resolution== | ||
<StructureSection load='3e9x' size='340' side='right' caption='[[3e9x]], [[Resolution|resolution]] 2.70Å' scene=''> | <StructureSection load='3e9x' size='340' side='right' caption='[[3e9x]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3e9x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E9X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E9X FirstGlance]. <br> | <table><tr><td colspan='2'>[[3e9x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E9X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E9X FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand= | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NIM:4-NITRO-2-PHENOXYMETHANESULFONANILIDE'>NIM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2dqv|2dqv]], [[2dxy|2dxy]], [[2o51|2o51]], [[2r9j|2r9j]], [[2px1|2px1]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2dqv|2dqv]], [[2dxy|2dxy]], [[2o51|2o51]], [[2r9j|2r9j]], [[2px1|2px1]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e9x OCA], [http://pdbe.org/3e9x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3e9x RCSB], [http://www.ebi.ac.uk/pdbsum/3e9x PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e9x OCA], [http://pdbe.org/3e9x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3e9x RCSB], [http://www.ebi.ac.uk/pdbsum/3e9x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3e9x ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 13: | Line 14: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e9/3e9x_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e9/3e9x_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 21:26, 2 December 2018
Crystal Structure of the Complex of C-lobe of Lactoferrin with Nimesulide at 2.7 A Resolution
| |||||||||||
Categories: Bos taurus | Balaji, K | Bhushan, A | Kaur, P | Mir, R | Sharma, S | Singh, N | Singh, T P | Sinha, M | Vikram, G | Antibiotic | Antimicrobial | C-lobe | Complex | Glycoprotein | Hydrolase | Ion transport | Iron | Iron transport | Lactoferrin | Metal binding protein | Metal-binding | Nimesulide | Protease | Secreted | Serine protease | Transport

