2zez
From Proteopedia
(New page: 200px {{Structure |PDB= 2zez |SIZE=350|CAPTION= <scene name='initialview01'>2zez</scene>, resolution 1.90Å |SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+F...) |
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|GENE= celA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=44256 Thermoanaerobacterium polysaccharolyticum]) | |GENE= celA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=44256 Thermoanaerobacterium polysaccharolyticum]) | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02018 CBM_4_9]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02018 CBM_4_9]</span> | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zez OCA], [http://www.ebi.ac.uk/pdbsum/2zez PDBsum | + | |RELATEDENTRY=[[2zew|2ZEW]], [[2zex|2ZEX]], [[2zey|2ZEY]] |
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zez OCA], [http://www.ebi.ac.uk/pdbsum/2zez PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zez RCSB]</span> | ||
}} | }} | ||
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[[Category: hydrolase]] | [[Category: hydrolase]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:20:46 2008'' |
Revision as of 02:20, 31 March 2008
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| , resolution 1.90Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , and | ||||||
| Ligands: | |||||||
| Gene: | celA (Thermoanaerobacterium polysaccharolyticum) | ||||||
| Domains: | CBM_4_9 | ||||||
| Related: | 2ZEW, 2ZEX, 2ZEY
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Family 16 Carbohydrate Binding Module-2
Overview
Enzymes that hydrolyze complex polysaccharides into simple sugars are modular in architecture and consist of single or multiple catalytic domains fused to targeting modules called carbohydrate binding modules (CBMs). CBMs bind to their ligands with high affinity, and increase the efficiency of the catalytic components by targeting the enzymes to its substrate. Here, we utilized a multi-disciplinary approach to characterize each of the two family 16 carbohydrate binding domain component of the highly active mannanase from the thermophile T. polysaccharolyticum. These represent the first crystal structures of family 16 CBMs. Calorimetric analysis show that while these CBMs demonstrate high specificity towards ss-1,4 linked sugars, they can engage both cello- and manno-polysaccharides. In order to elucidate the molecular basis for this specificity and selectivity, we have determined high resolution crystal structures of each of the two carbohydrate binding modules, as well as of binary complexes of CBM16-1 bound to either mannopentaose or cellopentaose. These results provide detailed molecular insights into ligand recognition and yield a framework for rational engineering experiments designed to expand the natural repertoire of these targeting modules.
About this Structure
2ZEZ is a Single protein structure of sequence from Thermoanaerobacterium polysaccharolyticum. Full crystallographic information is available from OCA.
Reference
Molecular basis for the selectivity and specificity of ligand recognition by the family 16 carbohydrate binding modules from thermoanaerobacterium polysaccharolyticum manA., Bae B, Ohene-Adjei S, Kocherginskaya S, Mackie RI, Spies MA, Cann IK, Nair SK, J Biol Chem. 2007 Nov 29;. PMID:18025086
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