5zmv

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'''Unreleased structure'''
 
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The entry 5zmv is ON HOLD until Paper Publication
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==Crystal structure of the E309A mutant of SR Ca2+-ATPase in E2(TG)==
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<StructureSection load='5zmv' size='340' side='right' caption='[[5zmv]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5zmv]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZMV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ZMV FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PTY:PHOSPHATIDYLETHANOLAMINE'>PTY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TG1:OCTANOIC+ACID+[3S-[3ALPHA,+3ABETA,+4ALPHA,+6BETA,+6ABETA,+7BETA,+8ALPHA(Z),+9BALPHA]]-6-(ACETYLOXY)-2,3,-3A,4,5,6,6A,7,8,9B-DECAHYDRO-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-8-[(2-METHYL-1-OXO-2-BUTENYL)OXY]-2-OXO-4-(1-OXOBUTOXY)-AZULENO[4,5-B]FURAN-7-YL+ESTER'>TG1</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Calcium-transporting_ATPase Calcium-transporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.8 3.6.3.8] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5zmv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zmv OCA], [http://pdbe.org/5zmv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zmv RCSB], [http://www.ebi.ac.uk/pdbsum/5zmv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zmv ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/AT2A1_RABIT AT2A1_RABIT]] This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Ca(2+)-ATPase of sarcoplasmic reticulum (SERCA1a) pumps two Ca(2+) per ATP hydrolyzed from the cytoplasm and two or three protons in the opposite direction. In the E2 state, after transferring Ca(2+) into the lumen of sarcoplasmic reticulum, all of the acidic residues that coordinate Ca(2+) are thought to be protonated, including the gating residue Glu309. Therefore a Glu309Gln substitution is not expected to significantly perturb the structure. Here we report crystal structures of the Glu309Gln and Glu309Ala mutants of SERCA1a under E2 conditions. The Glu309Gln mutant exhibits, unexpectedly, large structural rearrangements in both the cytoplasmic and transmembrane domains, apparently uncoupling them. However, the structure definitely represents E2 and, together with the help of quantum chemical calculations, allows us to postulate a mechanism for the E2 --&gt; E1 transition triggered by deprotonation of Glu309.
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Authors: Ogawa, H., Hirata, A., Tsueda, J., Toyoshima, C.
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Mechanism of the E2 to E1 transition in Ca(2+) pump revealed by crystal structures of gating residue mutants.,Tsunekawa N, Ogawa H, Tsueda J, Akiba T, Toyoshima C Proc Natl Acad Sci U S A. 2018 Nov 27. pii: 1815472115. doi:, 10.1073/pnas.1815472115. PMID:30482857<ref>PMID:30482857</ref>
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Description: Crystal structure of the E309A mutant of SR Ca2+-ATPase in E2(TG)
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 5zmv" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Calcium-transporting ATPase]]
[[Category: Hirata, A]]
[[Category: Hirata, A]]
[[Category: Ogawa, H]]
[[Category: Ogawa, H]]
[[Category: Toyoshima, C]]
[[Category: Toyoshima, C]]
[[Category: Tsueda, J]]
[[Category: Tsueda, J]]
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[[Category: Atp-binding]]
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[[Category: Calcium transport]]
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[[Category: Endoplasmic reticulum]]
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[[Category: Had fold]]
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[[Category: Hydrolase]]
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[[Category: Ion transport]]
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[[Category: Magnesium]]
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[[Category: Membrane protein]]
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[[Category: Metal-binding]]
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[[Category: Nucleotide-binding]]
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[[Category: P-type atpase]]
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[[Category: Phosphorylation]]
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[[Category: Sarcoplasmic reticulum]]
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[[Category: Transmembrane]]
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[[Category: Transport]]

Revision as of 06:40, 12 December 2018

Crystal structure of the E309A mutant of SR Ca2+-ATPase in E2(TG)

5zmv, resolution 3.30Å

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