This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3bcz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
|PDB= 3bcz |SIZE=350|CAPTION= <scene name='initialview01'>3bcz</scene>, resolution 2.10&Aring;
|PDB= 3bcz |SIZE=350|CAPTION= <scene name='initialview01'>3bcz</scene>, resolution 2.10&Aring;
|SITE= <scene name='pdbsite=AC1:Gol+Binding+Site+For+Residue+D+301'>AC1</scene>, <scene name='pdbsite=AC2:Gol+Binding+Site+For+Residue+A+302'>AC2</scene>, <scene name='pdbsite=AC3:Gol+Binding+Site+For+Residue+A+303'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+B+304'>AC4</scene> and <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+C+305'>AC5</scene>
|SITE= <scene name='pdbsite=AC1:Gol+Binding+Site+For+Residue+D+301'>AC1</scene>, <scene name='pdbsite=AC2:Gol+Binding+Site+For+Residue+A+302'>AC2</scene>, <scene name='pdbsite=AC3:Gol+Binding+Site+For+Residue+A+303'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+B+304'>AC4</scene> and <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+C+305'>AC5</scene>
-
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
|ACTIVITY=
|ACTIVITY=
|GENE= MEMO1, C2orf4, NS5ATP7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
|GENE= MEMO1, C2orf4, NS5ATP7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
 +
|DOMAIN=
 +
|RELATEDENTRY=[[3bd0|3BD0]]
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bcz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bcz OCA], [http://www.ebi.ac.uk/pdbsum/3bcz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bcz RCSB]</span>
}}
}}
Line 23: Line 26:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Qiu, C.]]
[[Category: Qiu, C.]]
-
[[Category: GOL]]
 
[[Category: alpha/beta structure]]
[[Category: alpha/beta structure]]
[[Category: peptide binding protein]]
[[Category: peptide binding protein]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:57:58 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:25:13 2008''

Revision as of 02:25, 31 March 2008


PDB ID 3bcz

Drag the structure with the mouse to rotate
, resolution 2.10Å
Sites: , , , and
Ligands: ,
Gene: MEMO1, C2orf4, NS5ATP7 (Homo sapiens)
Related: 3BD0


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Crystal structure of Memo


Overview

Memo (mediator of ErbB2-driven cell motility) is a 297-amino-acid protein recently shown to co-precipitate with the C terminus of ErbB2 and be required for ErbB2-driven cell motility. Memo is not homologous to any known signaling proteins, and how it mediates ErbB2 signals is not known. To provide a molecular basis for understanding Memo function, we have determined and report here the 2.1A crystal structure of human Memo and show it be homologous to class III nonheme iron-dependent dioxygenases, a structural class that now includes a zinc-binding protein of unknown function. No metal binding or enzymatic activity can be detected for Memo, but Memo does bind directly to a specific ErbB2-derived phosphopeptide encompassing Tyr-1227 using its vestigial enzymatic active site. Memo thus represents a new class of phosphotyrosine-binding protein.

About this Structure

3BCZ is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Memo Is Homologous to Nonheme Iron Dioxygenases and Binds an ErbB2-derived Phosphopeptide in Its Vestigial Active Site., Qiu C, Lienhard S, Hynes NE, Badache A, Leahy DJ, J Biol Chem. 2008 Feb 1;283(5):2734-40. Epub 2007 Nov 28. PMID:18045866

Page seeded by OCA on Mon Mar 31 05:25:13 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools