This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3biv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
|PDB= 3biv |SIZE=350|CAPTION= <scene name='initialview01'>3biv</scene>, resolution 1.8&Aring;
|PDB= 3biv |SIZE=350|CAPTION= <scene name='initialview01'>3biv</scene>, resolution 1.8&Aring;
|SITE=
|SITE=
-
|LIGAND= <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene> and <scene name='pdbligand=11U:'>11U</scene>
+
|LIGAND= <scene name='pdbligand=11U:(S)-N-(4-CARBAMIMIDOYLBENZYL)-1-(2-(CYCLOHEXYLAMINO)ETHANOYL)PYRROLIDINE-2-CARBOXAMIDE'>11U</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=TYS:SULFONATED+TYROSINE'>TYS</scene>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5]
+
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5] </span>
|GENE=
|GENE=
 +
|DOMAIN=
 +
|RELATEDENTRY=[[3biu|3BIU]], [[1k22|1K22]], [[1ypg|1YPG]], [[1k1o|1K1O]], [[2zc9|2ZC9]], [[2zda|2ZDA]]
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3biv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3biv OCA], [http://www.ebi.ac.uk/pdbsum/3biv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3biv RCSB]</span>
}}
}}
Line 27: Line 30:
[[Category: Sotriffer, C A.]]
[[Category: Sotriffer, C A.]]
[[Category: Steuber, H.]]
[[Category: Steuber, H.]]
-
[[Category: 11U]]
 
-
[[Category: NAG]]
 
[[Category: acute phase]]
[[Category: acute phase]]
[[Category: blood clooting/hydrolase inhibitor]]
[[Category: blood clooting/hydrolase inhibitor]]
Line 44: Line 45:
[[Category: zymogen]]
[[Category: zymogen]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:59:23 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:26:51 2008''

Revision as of 02:26, 31 March 2008


PDB ID 3biv

Drag the structure with the mouse to rotate
, resolution 1.8Å
Ligands: , ,
Activity: Thrombin, with EC number 3.4.21.5
Related: 3BIU, 1K22, 1YPG, 1K1O, 2ZC9, 2ZDA


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Human thrombin-in complex with UB-THR11


About this Structure

3BIV is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Thermodynamic inhibition profile of a cyclopentyl and a cyclohexyl derivative towards thrombin: the same but for different reasons., Gerlach C, Smolinski M, Steuber H, Sotriffer CA, Heine A, Hangauer DG, Klebe G, Angew Chem Int Ed Engl. 2007;46(44):8511-4. PMID:17902081

Page seeded by OCA on Mon Mar 31 05:26:51 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools