6huz

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m (Protected "6huz" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 6huz is ON HOLD
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==HmdII from Desulfurobacterium thermolithotrophum reconstituted with Fe-guanylylpyridinol (FeGP) cofactor and co-crystallized with methenyl-tetrahydrofolate form B==
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<StructureSection load='6huz' size='340' side='right' caption='[[6huz]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6huz]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HUZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HUZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE9:IRON-GUANYLYL+PYRIDINOL+COFACTOR'>FE9</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GUE:5,10-Methenyltetrahydrofolate'>GUE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6huz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6huz OCA], [http://pdbe.org/6huz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6huz RCSB], [http://www.ebi.ac.uk/pdbsum/6huz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6huz ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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[Fe]-hydrogenase (Hmd) catalyzes the reversible hydrogenation of methenyl-tetrahydromethanopterin (methenyl-H4MPT+) with H2. H4MPT is a C1-carrier of methanogenic archaea. One bacterial genus, Desulfurobacterium, contains putative genes for the Hmd paralog (HmdII) and the HcgA-G proteins. The latter are involved in biosynthesis of the prosthetic group of Hmd, the iron-guanylylpyridinol (FeGP) cofactor. This finding is intriguing because Hmd and HmdII strictly use H4MPT derivatives that are absent in most bacteria. We identified the presence of the FeGP cofactor in D. thermolithotrophum. The bacterial HmdII reconstituted with the FeGP cofactor catalyzed the enzyme reactions using the tetrahydrofolate derivatives, which are the bacterial C1 carrier, albeit with low enzymatic activities. Crystal structure provided the basis for how the enzyme was adapted to the bacterial C1-carrier. This finding has impact on future biotechnology by developing the Hmd variants functioning in Bacteria.
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Authors: Watanabe, T., Wagner, T., Huang, G., Kahnt, J., Ataka, K., Ermler, U., Shima, S.
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The bacterial [Fe]-hydrogenase paralog uses tetrahydrofolate derivatives as substrates.,Watanabe T, Wagner T, Huang G, Kahnt J, Ataka K, Ermler U, Shima S Angew Chem Int Ed Engl. 2019 Jan 2. doi: 10.1002/anie.201813465. PMID:30600878<ref>PMID:30600878</ref>
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Description: HmdII from Desulfurobacterium thermolithotrophum reconstituted with Fe-guanylylpyridinol (FeGP) cofactor and co-crystallized with methenyl-tetrahydrofolate form B
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Shima, S]]
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<div class="pdbe-citations 6huz" style="background-color:#fffaf0;"></div>
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[[Category: Wagner, T]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Ataka, K]]
[[Category: Ataka, K]]
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[[Category: Kahnt, J]]
 
[[Category: Ermler, U]]
[[Category: Ermler, U]]
[[Category: Huang, G]]
[[Category: Huang, G]]
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[[Category: Kahnt, J]]
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[[Category: Shima, S]]
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[[Category: Wagner, T]]
[[Category: Watanabe, T]]
[[Category: Watanabe, T]]
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[[Category: Cofactor biosynthesis]]
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[[Category: H2-activation]]
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[[Category: Hydrogenase]]
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[[Category: Lateral gene-transfer]]
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[[Category: Metalloenzyme]]
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[[Category: Oxidoreductase]]
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[[Category: Paralog]]
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[[Category: Sulfur-reducing bacteria]]
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[[Category: Tetrahydrofolate]]
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[[Category: Tetrahydromethanopterin]]

Revision as of 06:37, 9 January 2019

HmdII from Desulfurobacterium thermolithotrophum reconstituted with Fe-guanylylpyridinol (FeGP) cofactor and co-crystallized with methenyl-tetrahydrofolate form B

6huz, resolution 1.85Å

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