This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4cla

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
|PDB= 4cla |SIZE=350|CAPTION= <scene name='initialview01'>4cla</scene>, resolution 2.0&Aring;
|PDB= 4cla |SIZE=350|CAPTION= <scene name='initialview01'>4cla</scene>, resolution 2.0&Aring;
|SITE=
|SITE=
-
|LIGAND= <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene> and <scene name='pdbligand=CLM:CHLORAMPHENICOL'>CLM</scene>
+
|LIGAND= <scene name='pdbligand=CLM:CHLORAMPHENICOL'>CLM</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Chloramphenicol_O-acetyltransferase Chloramphenicol O-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.28 2.3.1.28]
+
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Chloramphenicol_O-acetyltransferase Chloramphenicol O-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.28 2.3.1.28] </span>
|GENE=
|GENE=
 +
|DOMAIN=
 +
|RELATEDENTRY=
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4cla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cla OCA], [http://www.ebi.ac.uk/pdbsum/4cla PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=4cla RCSB]</span>
}}
}}
Line 24: Line 27:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Leslie, A G.W.]]
[[Category: Leslie, A G.W.]]
-
[[Category: CLM]]
 
-
[[Category: CO]]
 
[[Category: transferase (acyltransferase)]]
[[Category: transferase (acyltransferase)]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:09:12 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:38:15 2008''

Revision as of 02:38, 31 March 2008


PDB ID 4cla

Drag the structure with the mouse to rotate
, resolution 2.0Å
Ligands: ,
Activity: Chloramphenicol O-acetyltransferase, with EC number 2.3.1.28
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



ALTERNATIVE BINDING MODES FOR CHLORAMPHENICOL AND 1-SUBSTITUTED CHLORAMPHENICOL ANALOGUES REVEALED BY SITE-DIRECTED MUTAGENESIS AND X-RAY CRYSTALLOGRAPHY OF CHLORAMPHENICOL ACETYLTRANSFERASE


Overview

Leucine-160 of chloramphenicol acetyltransferase (CAT) has been replaced by site-directed mutagenesis to investigate enzyme-ligand interactions at the 1-hydroxyl substituent of the substrate chloramphenicol. The consequences of the substitution of Leu-160 by glutamine and by phenylalanine were deduced from the steady-state kinetic parameters for acetyl transfer from acetyl-CoA to the 3-hydroxyl of chloramphenicol and its analogues 1-deoxychloramphenicol and 1-acetylchloramphenicol. The acetyl group of the latter, which is a substrate both in vivo and in vitro, could potentially bind in a similar position to the 1-hydroxyl of chloramphenicol, in close proximity to the side chain of Leu-160. In the case of Gln-160 CAT, large increases in Km for the three acetyl acceptors were accompanied by small decreases in kcat and in apparent affinity for acetyl-CoA. Such results are consistent with the introduction of the relatively hydrophilic amide in place of the delta-methyl groups of Leu-160. The kinetic properties of Phe-160 CAT were unexpected in that Km for each of the three acetyl acceptors was unchanged or reduced, compared to the equivalent parameters for the wild-type enzyme, whereas kcat fell significantly (44-83-fold) in each case. The ratios of specificity constants (kcat/Km) for the acetylation of chloramphenicol compared with the alternative acyl acceptors were similar for wild-type and mutant enzymes. As the residue substitutions for Leu-160 do not result in enhanced discrimination against the binding and acetylation of 1-acetylchloramphenicol, it appears unlikely that the 1-acetyl group binds to the CAT active site in the same position as that occupied by the 1-hydroxyl of chloramphenicol.(ABSTRACT TRUNCATED AT 250 WORDS)

About this Structure

4CLA is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Alternative binding modes for chloramphenicol and 1-substituted chloramphenicol analogues revealed by site-directed mutagenesis and X-ray crystallography of chloramphenicol acetyltransferase., Murray IA, Lewendon A, Williams JA, Cullis PM, Shaw WV, Leslie AG, Biochemistry. 1991 Apr 16;30(15):3763-70. PMID:2015231

Page seeded by OCA on Mon Mar 31 05:38:15 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools