6idp
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of Vibrio cholerae MATE transporter VcmN in the straight form== | |
+ | <StructureSection load='6idp' size='340' side='right' caption='[[6idp]], [[Resolution|resolution]] 2.21Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6idp]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IDP FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6idp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6idp OCA], [http://pdbe.org/6idp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6idp RCSB], [http://www.ebi.ac.uk/pdbsum/6idp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6idp ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Multidrug and toxic compound extrusion (MATE) transporters efflux toxic compounds using a Na(+) or H(+) gradient across the membrane. Although the structures of MATE transporters have been reported, the cation-coupled substrate transport mechanism remains controversial. Here we report crystal structures of VcmN, a Vibrio cholerae MATE transporter driven by the H(+) gradient. High-resolution structures in two distinct conformations associated with different pHs revealed that the rearrangement of the hydrogen-bonding network around the conserved Asp35 induces the bending of transmembrane helix 1, as in the case of the H(+)-coupled Pyrococcus furiosus MATE transporter. We also determined the crystal structure of the D35N mutant, which captured a unique conformation of TM1 facilitated by an altered hydrogen-bonding network. Based on the present results, we propose a common step in the transport cycle shared among prokaryotic H(+)-coupled MATE transporters. | ||
- | + | Structural Basis of H(+)-Dependent Conformational Change in a Bacterial MATE Transporter.,Kusakizako T, Claxton DP, Tanaka Y, Maturana AD, Kuroda T, Ishitani R, Mchaourab HS, Nureki O Structure. 2018 Oct 30. pii: S0969-2126(18)30365-4. doi:, 10.1016/j.str.2018.10.004. PMID:30449688<ref>PMID:30449688</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 6idp" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Claxton, D P]] | ||
+ | [[Category: Ishitani, R]] | ||
+ | [[Category: Kuroda, T]] | ||
+ | [[Category: Kusakizako, T]] | ||
+ | [[Category: Maturana, A D]] | ||
+ | [[Category: Mchaourab, H S]] | ||
+ | [[Category: Nureki, O]] | ||
+ | [[Category: Tanaka, Y]] | ||
+ | [[Category: Mate multidrug transporter]] | ||
+ | [[Category: Transport protein]] |
Revision as of 12:11, 16 January 2019
Crystal structure of Vibrio cholerae MATE transporter VcmN in the straight form
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