6gdf

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m (Protected "6gdf" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 6gdf is ON HOLD
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==DIHYDROOROTASE FROM AQUIFEX AEOLICUS UNDER 600 BAR OF HYDROSTATIC PRESSURE==
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<StructureSection load='6gdf' size='340' side='right' caption='[[6gdf]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6gdf]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GDF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GDF FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1xrf|1xrf]], [[1xrt|1xrt]]</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydroorotase Dihydroorotase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.3 3.5.2.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6gdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gdf OCA], [http://pdbe.org/6gdf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6gdf RCSB], [http://www.ebi.ac.uk/pdbsum/6gdf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6gdf ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Dihydroorotase is involved in the de novo synthesis of pyrimidine in virtually all organisms, and it is usually associated with two other enzymes found in this biosynthetic pathway, carbamylphosphate synthetase and/or aspartate transcarbamylase. In the hyperthermophilic bacterium Aquifex aeolicus, aspartate transcarbamylase and dihydroorotase are non-covalently associated. Upon dissociation, aspartate transcarbamylase keeps its activity entirely while dihydroorotase is totally inactivated. It was previously shown that high pressure fully restores the activity of this isolated dihydroorotase. On the basis of kinetic studies, site-directed mutagenesis and the use of peptides mimicking loop A, a loop that appears to block access to the active site, it was proposed that this pressure-induced reactivation was due to the decrease in the volume of the system, -DeltaV, resulting from the disruption of known ionic interactions between the loop and the main part of the protein. In the present work, this interpretation is more precisely demonstrated by the determination of the crystallographic structure of isolated dihydroorotase under pressure. In addition to the loop displacements, pressure induces a discrete rearrangement of the catalytic site aspartate 305, an effect that might additionally contribute to the reactivation of this enzyme. This article is protected by copyright. All rights reserved.
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Authors: Prange, T., Girard, E., Herve, G., Evans, D.R.
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Pressure-induced activation of latent Dihydroorotase from Aquifex aeolicus as revealed by high pressure protein crystallography.,Prange T, Girard E, Fourme R, Dhaussy AC, Edwards B, Vaishnav A, Patel C, Guy-Evans H, Herve G, Evans D FEBS J. 2019 Jan 18. doi: 10.1111/febs.14758. PMID:30657257<ref>PMID:30657257</ref>
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Description: DIHYDROOROTASE FROM AQUIFEX AEOLICUS UNDER 600 BAR OF HYDROSTATIC PRESSURE
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Herve, G]]
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<div class="pdbe-citations 6gdf" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Dihydroorotase]]
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[[Category: Evans, D R]]
[[Category: Girard, E]]
[[Category: Girard, E]]
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[[Category: Evans, D.R]]
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[[Category: Herve, G]]
[[Category: Prange, T]]
[[Category: Prange, T]]
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[[Category: Aquifex aeolicus]]
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[[Category: At 600 bar hydrostatic pressure]]
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[[Category: Hydrolase]]
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[[Category: Room temperature]]

Revision as of 08:25, 30 January 2019

DIHYDROOROTASE FROM AQUIFEX AEOLICUS UNDER 600 BAR OF HYDROSTATIC PRESSURE

6gdf, resolution 2.50Å

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