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User:Jaime Prilusky/Test/Viewer
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< User:Jaime Prilusky(Difference between revisions)
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The addition of the ''viewer'' parameter to ''<StructureSection'' allows to choose between alternative engines for rendering a structure. Current valid values are '''jmol''' <ref>Jmol: an open-source browser-based HTML5 viewer and stand-alone Java viewer for chemical structures in 3D [http://jmol.org] </ref> (default) and '''molstar''' <ref>Mol* (/'molstar/) is an open collaboration started by PDBe and RCSB PDB to provide a technology stack for data delivery and analysis tools of macromolecules [https://molstar.org/]</ref>. | The addition of the ''viewer'' parameter to ''<StructureSection'' allows to choose between alternative engines for rendering a structure. Current valid values are '''jmol''' <ref>Jmol: an open-source browser-based HTML5 viewer and stand-alone Java viewer for chemical structures in 3D [http://jmol.org] </ref> (default) and '''molstar''' <ref>Mol* (/'molstar/) is an open collaboration started by PDBe and RCSB PDB to provide a technology stack for data delivery and analysis tools of macromolecules [https://molstar.org/]</ref>. | ||
==Under development== | ==Under development== | ||
| - | A few features need additional development to work under different viewers, like <scene> and SAT. Examples are these links to <scene name="/12/3456/Sample/1">color</scene> by Group, and to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. | + | A few features need additional development to work under different viewers, like <scene>, initialView and SAT. Examples are these links to <scene name="/12/3456/Sample/1">color</scene> by Group, and to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. |
==Help on the tools== | ==Help on the tools== | ||
The cheatsheet for using LiteMol viewer, available at [[http://www.ebi.ac.uk/pdbe/litemol PDBe]], should be Ok for the MolStar viewer in use. | The cheatsheet for using LiteMol viewer, available at [[http://www.ebi.ac.uk/pdbe/litemol PDBe]], should be Ok for the MolStar viewer in use. | ||
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- ↑ Jmol: an open-source browser-based HTML5 viewer and stand-alone Java viewer for chemical structures in 3D [1]
- ↑ Mol* (/'molstar/) is an open collaboration started by PDBe and RCSB PDB to provide a technology stack for data delivery and analysis tools of macromolecules [2]
- ↑ Down the Rabbit-Hole. Alice's Adventures in Wonderland, by Lewis Carroll
