Actin
From Proteopedia
(Difference between revisions)
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</StructureSection> | </StructureSection> | ||
| - | == 3D Structures of Actin == | ||
| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| - | |||
| - | * α actin 1 (Aa) | ||
| - | |||
| - | **[[3hbt]], [[2zwh]], [[1nwk]], [[1j6z]], [[3g37]], [[2y83]] – rAa – rabbit<br /> | ||
| - | **[[2q1n]], [[2q31]], [[2a5x]], [[1rdw]], [[1rfq]], [[1lcu]] – rAa – dimer<br /> | ||
| - | **[[3mfp]], [[4a7n]], [[3jbj]], [[6bnu]] – rAa + ADP – Cryo EM<br /> | ||
| - | **[[2hmp]] – rAa – protease cleaved<br /> | ||
| - | **[[2zwh]], [[2gwj]], [[2gwk]] – rAa-ATP<br /> | ||
| - | **[[3j8i]], [[3j8j]], [[3j8k]], [[6bno]], [[6avb]], [[6av9]], [[5mvy]], [[5mva]], [[6fhl]], [[5oof]], [[5ooe]], [[5ood]], [[5ooc]], [[5onv]] – rAa + ADP – Cryo EM<br /> | ||
| - | **[[3b5u]] – rAa filament – fiber diffraction<br /> | ||
| - | |||
| - | * α actin 1 complex with gelsolin | ||
| - | |||
| - | **[[1mdu]] – cAa+hGelsolin - chicken<br /> | ||
| - | **[[2ff3]] - rAa+ hGelsolin +domains of hWASP <br /> | ||
| - | **[[1eqy]], [[3cjb]], [[1p8z]], [[3ffk]], [[3tu5]], [[4pkg]], [[4pkh]], [[4pki]] – rAa+hGelsolin<br /> | ||
| - | **[[1rgi]] - rAa+hoGelsolin – horse (ho)<br /> | ||
| - | **[[1t44]] - rAa+hGelsolin/mThymosin β-4 <br /> | ||
| - | **[[4z94]] - rAa+hGelsolin/tropomodulin/leiomodin<br /> | ||
| - | **[[2ff6]] - rAa+DmCiboulot+hGelsolin <br /> | ||
| - | **[[4cbu]], [[5mvv]] – PfAa + gelsolin – ''Plasmodium falciparum''<br /> | ||
| - | **[[4cbw]] – PbAa + gelsolin – ''Plasmodium berghei''<br /> | ||
| - | |||
| - | * α actin 1 complex with small molecule | ||
| - | |||
| - | **[[2q36]], [[1qz5]] – rAa+kabiramide C + ATP <br /> | ||
| - | **[[2vyp]] – rAa+myxobacterial rhizopodin + ATP<br /> | ||
| - | **[[1ijj]] - rAa+latrunculin A<br /> | ||
| - | **[[2fxu]] – rAa+bistramide A<br /> | ||
| - | **[[1wua]] – rAa+alpyronine A<br /> | ||
| - | **[[4k41]], [[1qz6]], [[1s22]], [[4k42]], [[4k43]], [[2asm]], [[2asp]], [[2aso]], [[1yxq]], [[1s22]], [[3m6g]], [[6mgo]] - rAa+ macrolide<br /> | ||
| - | **[[1qz6]] – rAa+jaspisamide A<br /> | ||
| - | **[[5ogw]] – PfAa + jasplakinolide + ADP – Cryo EM <br /> | ||
| - | **[[6bqw]] – Aa + AMPPNP – ''Bacillus subtilis'' - Cryo EM <br /> | ||
| - | |||
| - | * α actin 1 complex with protein | ||
| - | |||
| - | **[[6fm2]] – hAa + adenylyl cyclase-asociated protein <br /> | ||
| - | **[[2w49]] – cAa +troponin C+ troponin T+ troponin I+ tropomyosin α-1 <br /> | ||
| - | **[[3j4k]] - cAa + tropomyosin<br /> | ||
| - | **[[6d8c]] - cAa + filamin + phalloidin – Cryo EM<br /> | ||
| - | **[[5yu8]] – cAa + cofilin 2<br /> | ||
| - | **[[3j8a]] - mAa + tropomyosin - mouse<br /> | ||
| - | **[[4a7f]], [[4a7h]], [[4a7l]], [[5h53]], [[5kg8]] – rAa + tropomyosin α-1 + myosin heavy chain (mutant) – Cryo EM<br /> | ||
| - | **[[5jlf]], [[3j8a]] – rAa + tropomyosin alpha-1 + ADP – Cryo EM<br /> | ||
| - | **[[6c1h]], [[6c1g]], [[6c1d]] - rAa + myosin + calmodulin<br /> | ||
| - | **[[6bnv]] - rAa + myosin + calmodulin – Cryo EM<br /> | ||
| - | **[[6bnw]], [[6bnp]] - rAa + myosin – Cryo EM<br /> | ||
| - | **[[6bnq]], [[6blh]] - rAa + myosin + ADP – Cryo EM<br /> | ||
| - | **[[2v51]], [[2v52]], [[2yje]], [[2yjf]] – rAa+mMKL/Myocardin-like protein <br /> | ||
| - | **[[2vcp]] – rAa+ neural wiskott-aldrich syndrome protein (hWASP) – human (h)<br /> | ||
| - | **[[2a3z]], [[2a40]], [[2a41]] – rAa+cDNase I+domains of hWASP – cow (c)<br /> | ||
| - | **[[2a42]] – rAa+cDNase I<br /> | ||
| - | **[[4eah]] – rAa + formin-like protein 3 FH2 domain<br /> | ||
| - | **[[3daw]] – rAa+mTwinfilin-1<br /> | ||
| - | **[[3buz]] – rAa+Iota toxin component IA<br /> | ||
| - | **[[4b1u]], [[4b1v]], [[4b1w]], [[4b1x]], [[4b1y]], [[4b1z]] – rAa + phosphatase and actin regulator<br /> | ||
| - | **[[4pl8]] - rAa+ Thymosin β-4<br /> | ||
| - | **[[3u8x]] - rAa+DmThymosin β-4 - ''Drosophila melanogaster''<br /> | ||
| - | **[[1esv]] - rAa+hGelsolin+ latrunculin A<br /> | ||
| - | **[[3cjc]] - rAa+hGelsolin+cDNase I<br /> | ||
| - | **[[2d1k]] - rAa+hWH2 domain of MIN+cDNase I<br /> | ||
| - | **[[2pbd]], [[5zzb]], [[5zza]], [[5yee]] – rAa+hProfilin-1<br /> | ||
| - | **[[2pav]] - rAa+hProfilin-1+hVASP<br /> | ||
| - | **[[2q97]] – rAa+toxofilin – ''Toxoplasma gondii''<br /> | ||
| - | **[[2q0r]] – rAa+pectenotoxin-2<br /> | ||
| - | **[[2q0u]] - rAa+pectenotoxin-2+latrunculin B<br /> | ||
| - | **[[1y64]] – rAa+yBNI1 domain FH2 - yeast<br /> | ||
| - | **[[1sqk]] – rAa+DmCiboulot <br /> | ||
| - | **[[3sjh]], [[3u9d]], [[3u9z]] - rAa+DmCiboulot thymosin β-4 domain<br /> | ||
| - | **[[3mn5]] – rAa+ DmSpire WH2 domain<br /> | ||
| - | **[[1lot]], [[1kxp]], [[1ma9]] – rAa+hVitamin D binding protein<br /> | ||
| - | **[[3m1f]] – rAa+VOPL WH2 domain<br /> | ||
| - | **[[3m3n]] – rAa+mN-WASP<br /> | ||
| - | **[[3tpq]] – rAa + MAL RPEL domain<br /> | ||
| - | **[[3ue5]] – rAa + spire domain D<br /> | ||
| - | **[[4gy2]] – rAa + ι toxin component IA <br /> | ||
| - | **[[3jbi]] – rAa + vinculin - CryoEM <br /> | ||
| - | **[[3jbk]] – rAa + metavinculin + ADP - CryoEM <br /> | ||
| - | **[[4wyb]] – rAa + BUD6 <br /> | ||
| - | **[[4v0u]] – rAa + protein phosphatase 1 +serine/threonine protein phosphatase <br /> | ||
| - | **[[4h0t]] – rAa + ι toxin component IA + ADPR<br /> | ||
| - | **[[4h03]], [[4h0v]], [[4h0x]], [[4h0y]] – rAa + ι toxin component IA + NAD<br /> | ||
| - | **[[5ypu]] – rAa + protein cordon-bleu WH2 domain<br /> | ||
| - | **[[5i9e]] – yAa + actin-related protein 4 + helicase <br /> | ||
| - | **[[5ce3]], [[4ci6]] – Aa + protein kinase YopO – fall armyworm <br /> | ||
| - | **[[5nol]], [[5noj]], [[5nog]] – Aa + tropomyosin alpha-1 + ADP – pig - Cryo EM<br /> | ||
| - | |||
| - | * β actin (Ab) | ||
| - | |||
| - | **[[3lue]] – hAb+hAlpha-actinin <br /> | ||
| - | **[[3byh]] – hAb+hFimbrin ABD2 – Cryo EM<br /> | ||
| - | **[[3j82]] – hAb + DNGR-1 - CryoEM <br /> | ||
| - | **[[6anu]] – hAb + spectrin – Cryo EM <br /> | ||
| - | **[[2oan]] – cAb<br /> | ||
| - | **[[3j0s]] – cAb + cofilin 2<br /> | ||
| - | **[[3u4l]], [[3ub5]] – Ab + profilin-1 - bovine<br /> | ||
| - | **[[4cbx]] – PbAb + gelsolin <br /> | ||
| - | |||
| - | * γ 1 actin (Ag) | ||
| - | |||
| - | **[[1h1v]] – hAg+rGelsolin<br /> | ||
| - | **[[5jlh]], [[6g2t]], [[6cxj]], [[6cxi]] – hAg + myosin-14 + tropomyosin alpha-3 – Cryo-EM <br /> | ||
| - | **[[1atn]] – rAg+cDNase I<br /> | ||
| - | **[[3chw]] – Major DdAg+hProfilin+poly-Pro repeat – ''Dictyostelium discoideum''<br /> | ||
| - | **[[3ci5]], [[3cip]], [[1nmd]] - Major DdAg+hGelsolin<br /> | ||
| - | **[[3a5l]], [[3a5m]], [[3a5n]], [[3a5o]] - Major DdAg+hGelsolin (mutant)<br /> | ||
| - | **[[1c0g]], [[1dej]] – DdAg:tetrahymenatA+hGelsolin<br /> | ||
| - | **[[1nm1]] - DdAg+hGelsolin+Mg-ATP<br /> | ||
| - | **[[1nlv]], [[1c0f]] – DdAg+hGelsolin<br /> | ||
| - | **[[1hlu]], [[2btf]] – cAg+cProfilin<br /> | ||
| - | **[[1o1g]], [[1o1a]], [[1o1b]], [[1o1c]], [[1o1d]], [[1o1e]], [[1o1f]], [[1o18]], [[1o19]], [[1mvw]], [[1m8q]] –cAg+cMyosin II - tomography<br /> | ||
| - | **[[3w3d]] – cAg + DNase I<br /> | ||
| - | **[[1yvn]] – yA (mutant)+hGelsolin <br /> | ||
| - | **[[1yag]] - yA+hGelsolin<br /> | ||
| - | **[[1d4x]] – Ag 1/3+hGelsolin – ''C. elegans''<br /> | ||
| - | **[[3b63]] – actin filament – ''Limulus polyphemus''<br /> | ||
| - | |||
| - | * Actin 5C (A5C) | ||
| - | |||
| - | **[[4rwt]], [[5wfn]] – DmA5C + leiomodin<br /> | ||
| - | **[[3eks]] – DmAg 5c (mutant)<br /> | ||
| - | **[[3eku]] – DmAg 5c (mutant)+cytochalasin D<br /> | ||
| - | **[[3el2]], [[2hf4]] - DmAg 5c (mutant)+Ca-ATP<br /> | ||
| - | **[[2hf3]] - DmAg 5c (mutant)+Ca-ADP<br /> | ||
| - | **[[3mmv]] – DmA-5C+spire WH2 domain<br /> | ||
| - | **[[3mn6]], [[3mn7]], [[3mn9]] - DmA-5C (mutant)+spire<br /> | ||
| - | **[[4jhd]] – DmAg 5c + protein cordon-bleu WH2 domain<br /> | ||
| - | **[[4efh]] – A + spire domains C,D – ''Acanthamoeba castellanii'' | ||
| - | }} | ||
== Reference == | == Reference == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:48, 27 February 2019
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Reference
- ↑ Otterbein LR, Graceffa P, Dominguez R. The crystal structure of uncomplexed actin in the ADP state. Science. 2001 Jul 27;293(5530):708-11. PMID:11474115 doi:10.1126/science.1059700
- ↑ Wang H, Robinson RC, Burtnick LD. The structure of native G-actin. Cytoskeleton (Hoboken). 2010 Jul;67(7):456-65. PMID:20540085 doi:10.1002/cm.20458
