6jbz
From Proteopedia
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==Structural analysis of molybdopterin synthases from two mycobacteria pathogens== | ==Structural analysis of molybdopterin synthases from two mycobacteria pathogens== | ||
| - | <StructureSection load='6jbz' size='340' side='right' caption='[[6jbz]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='6jbz' size='340' side='right' caption='[[6jbz]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6jbz]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JBZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6JBZ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6jbz]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JBZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6JBZ FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">moaE2, DSI35_12490, ERS007665_01777, ERS023446_04125, ERS027644_03382, ERS027646_04529, ERS027651_03265, ERS027654_03076, ERS027656_02816, ERS027659_04568, ERS031537_04564, ERS124361_04403, SAMEA2682864_02201, SAMEA2683035_02189 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884]), moaD2, DSI35_02305, ERS007661_02601, ERS007663_03167, ERS007665_02512, ERS007672_04797, ERS007679_03857, ERS007688_03620, ERS007703_04370, ERS007720_02994, ERS007722_03637, ERS007726_00134, ERS007739_02763, ERS007741_03204, ERS023446_04078, ERS024213_03738, ERS024276_02321, ERS027644_02085, ERS027646_03803, ERS027651_01514, ERS027652_02678, ERS027653_03930, ERS027654_04370, ERS027659_02621, ERS027661_03197, ERS027666_05139, ERS031537_04168, ERS124361_05937, SAMEA2682864_02198, SAMEA2683035_02192 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Molybdopterin_synthase Molybdopterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.8.1.12 2.8.1.12] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Molybdopterin_synthase Molybdopterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.8.1.12 2.8.1.12] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6jbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jbz OCA], [http://pdbe.org/6jbz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jbz RCSB], [http://www.ebi.ac.uk/pdbsum/6jbz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jbz ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6jbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jbz OCA], [http://pdbe.org/6jbz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jbz RCSB], [http://www.ebi.ac.uk/pdbsum/6jbz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jbz ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The molybdenum cofactor, composed of molybdopterin and molybdenum, is a necessary compound for the catalytic activity of molybdenum enzymes. Molybdenum cofactor biosynthesis is a conserved multi-step process involving several enzymes. Molybdopterin synthase, a hetero-tetrameric enzyme composed of a pair of MoaE-MoaD subunits, catalyzes the generation of the cis-dithiolene group of molybdopterin in the second step of the process. The cis-dithiolene group can covalently bind molybdenum. Most mycobacterial species possess several genes encoding the full pathway of molybdenum cofactor biosynthesis. In M. smegmatis, the moaD2 and moaE2 genes encode the functional molybdopterin synthase. However, M. tuberculosis has genes encoding several molybdopterin synthase subunit homologs, including moaD1, moaD2, moaE1, moaE2, and moaX, which encodes a MoaD-MoaE fusion protein. Previous studies have shown that moaD2 and moaE2 encode functional molybdopterin synthase. Here, we report the crystal structures of two substrate-free molybdopterin synthases from two different mycobacterial pathogens, M. tuberculosis and M. smegmatis, at 2.1A and 2.6A resolutions, respectively. The overall structure of both molybdopterin synthases was hetero-tetrameric, consisting of a MoaE2 dimer flanked on either side by single MoaD2 subunits. The carboxyl-terminal domain of MoaD2 inserted into MoaE2, forming the active pocket. A comparison with previously reported molybdopterin synthase structures showed that substrate-binding and catalytic residues were conserved, despite low sequence similarity among these enzymes. The low sequence identity at the MoaE-MoaD heterodimer interface may provide the structural basis to explore mycobacterial inhibitors. | ||
| + | |||
| + | Structural analysis of molybdopterin synthases from two mycobacterial pathogens.,Wang H, Chen X, Zhang W, Zhou W, Liu X, Rao Z Biochem Biophys Res Commun. 2019 Mar 26;511(1):21-27. doi:, 10.1016/j.bbrc.2019.02.024. Epub 2019 Feb 11. PMID:30765225<ref>PMID:30765225</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6jbz" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Revision as of 08:29, 6 March 2019
Structural analysis of molybdopterin synthases from two mycobacteria pathogens
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