Human Keto Acyl Reductase
From Proteopedia
(Difference between revisions)
Line 11: | Line 11: | ||
== Structural highlights == Crystal structure of human mitochondrial heteroterameric KAR is solved at 2.34 Å. The co-factors NAD is selectively bound to the HSD17B8 subunits whereas NADP is bound to the CBR4 subunits. Both NAD and NADP are stabilized by several conserved hydrogen bonding interactions in their respective binding sites. The Asp42, Arg12 and Arg 34 are the crucial residues for co-factor recognition. Acetate ion is also bound near NAD, which identifies the fatty acyl chain binding pocket. Ser 135, Tyr148 and Lys152 in CBR4 subunit are the catalytic triad residues involved in the catalysis. <ref>PMID:25203508</ref> | == Structural highlights == Crystal structure of human mitochondrial heteroterameric KAR is solved at 2.34 Å. The co-factors NAD is selectively bound to the HSD17B8 subunits whereas NADP is bound to the CBR4 subunits. Both NAD and NADP are stabilized by several conserved hydrogen bonding interactions in their respective binding sites. The Asp42, Arg12 and Arg 34 are the crucial residues for co-factor recognition. Acetate ion is also bound near NAD, which identifies the fatty acyl chain binding pocket. Ser 135, Tyr148 and Lys152 in CBR4 subunit are the catalytic triad residues involved in the catalysis. <ref>PMID:25203508</ref> | ||
- | <scene name='80/809823/Nad-a/2'>NAD is bound in HSD17B8 subunit | + | <scene name='80/809823/Cofactors/1'> cofactors </scene> are bound to the each subunit. <scene name='80/809823/Nad-a/2'>NAD </scene> is bound in HSD17B8 subunit. is bound to the CBR4 subunit. |
<scene name='80/809823/All_nadp/2'>NADP</scene> is bound in each of the two CBR4 subunits , and <scene name='80/809823/Nad-a/1'>NAD</scene> is bound in each of the two HSD17B8 subunits in heterotetrameric structure. <scene name='80/809823/Ethanediol/1'> 1,2-Ethanediol is bound near the NAD bindig site. </scene><scene name='80/809823/Glycerol/1'>glycerol</scene> is also bound in the structure. | <scene name='80/809823/All_nadp/2'>NADP</scene> is bound in each of the two CBR4 subunits , and <scene name='80/809823/Nad-a/1'>NAD</scene> is bound in each of the two HSD17B8 subunits in heterotetrameric structure. <scene name='80/809823/Ethanediol/1'> 1,2-Ethanediol is bound near the NAD bindig site. </scene><scene name='80/809823/Glycerol/1'>glycerol</scene> is also bound in the structure. |
Revision as of 14:40, 15 March 2019
==Your Heading Here (maybe something like 'Structure')==Crystal structure of heterotetrameric human ketoacyl reductase complexed with NAD and NADP
|
References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
- ↑ Venkatesan R, Sah-Teli SK, Awoniyi LO, Jiang G, Prus P, Kastaniotis AJ, Hiltunen JK, Wierenga RK, Chen Z. Insights into mitochondrial fatty acid synthesis from the structure of heterotetrameric 3-ketoacyl-ACP reductase/3R-hydroxyacyl-CoA dehydrogenase. Nat Commun. 2014 Sep 9;5:4805. doi: 10.1038/ncomms5805. PMID:25203508 doi:http://dx.doi.org/10.1038/ncomms5805
- ↑ Venkatesan R, Sah-Teli SK, Awoniyi LO, Jiang G, Prus P, Kastaniotis AJ, Hiltunen JK, Wierenga RK, Chen Z. Insights into mitochondrial fatty acid synthesis from the structure of heterotetrameric 3-ketoacyl-ACP reductase/3R-hydroxyacyl-CoA dehydrogenase. Nat Commun. 2014 Sep 9;5:4805. doi: 10.1038/ncomms5805. PMID:25203508 doi:http://dx.doi.org/10.1038/ncomms5805