User:Cassandra Marsh/Sandbox 1
From Proteopedia
(Difference between revisions)
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===Function=== | ===Function=== | ||
| - | + | <scene name='81/811714/Residues_50-55/1'>Residues 50-55</scene> | |
==Inhibition== | ==Inhibition== | ||
| - | + | <ref name="Ransey">PMID:28504306</ref> | |
==Potassium Binding Site== | ==Potassium Binding Site== | ||
[[Image:Potassium binding.png|400 px|right|thumb|Figure 1. The coolest image of this protein EVAH!!!]] | [[Image:Potassium binding.png|400 px|right|thumb|Figure 1. The coolest image of this protein EVAH!!!]] | ||
==Nucleophilic Water== | ==Nucleophilic Water== | ||
| - | + | <ref name="Vannini">PMID:17721440</ref> | |
==Aspartate 101== | ==Aspartate 101== | ||
| - | + | <ref name="Ransey" /> | |
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes. | This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes. | ||
Revision as of 18:25, 22 March 2019
Histone Deacetylase 8 (HDAC 8), H. sapians
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
- ↑ 3.0 3.1 Ransey E, Paredes E, Dey SK, Das SR, Heroux A, Macbeth MR. Crystal structure of the Entamoeba histolytica RNA lariat debranching enzyme EhDbr1 reveals a catalytic Zn(2+) /Mn(2+) heterobinucleation. FEBS Lett. 2017 Jul;591(13):2003-2010. doi: 10.1002/1873-3468.12677. Epub 2017, Jun 14. PMID:28504306 doi:http://dx.doi.org/10.1002/1873-3468.12677
- ↑ Vannini A, Volpari C, Gallinari P, Jones P, Mattu M, Carfi A, De Francesco R, Steinkuhler C, Di Marco S. Substrate binding to histone deacetylases as shown by the crystal structure of the HDAC8-substrate complex. EMBO Rep. 2007 Sep;8(9):879-84. Epub 2007 Aug 10. PMID:17721440
Student Contributors
- Cassandra Marsh
- Courtney Brown
- Carolyn Hurdle
