2n86
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==NMR structure of OtTx1a - ICK== | ==NMR structure of OtTx1a - ICK== | ||
| - | <StructureSection load='2n86' size='340' side='right' caption='[[2n86]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2n86' size='340' side='right'caption='[[2n86]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2n86]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lynx_spider Lynx spider]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2N86 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2N86 FirstGlance]. <br> | <table><tr><td colspan='2'>[[2n86]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lynx_spider Lynx spider]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2N86 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2N86 FirstGlance]. <br> | ||
| Line 7: | Line 7: | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2n86 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2n86 OCA], [http://pdbe.org/2n86 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2n86 RCSB], [http://www.ebi.ac.uk/pdbsum/2n86 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2n86 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2n86 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2n86 OCA], [http://pdbe.org/2n86 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2n86 RCSB], [http://www.ebi.ac.uk/pdbsum/2n86 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2n86 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | We have recently demonstrated that a common phenomenon in evolution of spider venom composition is the emergence of so-called modular toxins consisting of two domains, each corresponding to a "usual" single-domain toxin. In this article, we describe the structure of two domains that build up a modular toxin named spiderine or OtTx1a from the venom of Oxyopes takobius. Both domains were investigated by solution NMR in water and detergent micelles used to mimic membrane environment. The N-terminal spiderine domain OtTx1a-AMP (41 amino acid residues) contains no cysteines. It is disordered in aqueous solution but in micelles, it assumes a stable amphiphilic structure consisting of two alpha-helices separated by a flexible linker. On the contrary, the C-terminal domain OtTx1a-ICK (59 residues) is a disulfide-rich polypeptide reticulated by five S-S bridges. It presents a stable structure in water and its core is the inhibitor cystine knot (ICK) or knottin motif that is common among single-domain neurotoxins. OtTx1a-ICK structure is the first knottin with five disulfide bridges and it represents a good reference for the whole oxytoxin family. The affinity of both domains to membranes was measured with NMR using titration by liposome suspensions. In agreement with biological tests, OtTx1a-AMP was found to show high membrane affinity explaining its potent antimicrobial properties. | ||
| + | |||
| + | Modular toxin from the lynx spider Oxyopes takobius: Structure of spiderine domains in solution and membrane-mimicking environment.,Nadezhdin KD, Romanovskaia DD, Sachkova MY, Oparin PB, Kovalchuk SI, Grishin EV, Arseniev AS, Vassilevski AA Protein Sci. 2017 Mar;26(3):611-616. doi: 10.1002/pro.3101. Epub 2017 Feb 12. PMID:27997708<ref>PMID:27997708</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 2n86" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Lynx spider]] | [[Category: Lynx spider]] | ||
[[Category: Arseniev, A]] | [[Category: Arseniev, A]] | ||
Revision as of 06:15, 17 April 2019
NMR structure of OtTx1a - ICK
| |||||||||||
