6e58

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6e58 is ON HOLD until Paper Publication
+
==Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2)==
 +
<StructureSection load='6e58' size='340' side='right'caption='[[6e58]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6e58]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_m49_591 Streptococcus pyogenes m49 591]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E58 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6E58 FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">endoS, Spy49_1414c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=294934 Streptococcus pyogenes M49 591])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6e58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e58 OCA], [http://pdbe.org/6e58 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6e58 RCSB], [http://www.ebi.ac.uk/pdbsum/6e58 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6e58 ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Immunoglobulin G (IgG) glycosylation critically modulates antibody effector functions. Streptococcus pyogenes secretes a unique endo-beta-N-acetylglucosaminidase, EndoS2, which deglycosylates the conserved N-linked glycan at Asn297 on IgG Fc to eliminate its effector functions and evade the immune system. EndoS2 and specific point mutants have been used to chemoenzymatically synthesize antibodies with customizable glycosylation for gain of functions. EndoS2 is useful in these schemes because it accommodates a broad range of N-glycans, including high-mannose, complex, and hybrid types; however, its mechanism of substrate recognition is poorly understood. We present crystal structures of EndoS2 alone and bound to complex and high-mannose glycans; the broad N-glycan specificity is governed by critical loops that shape the binding site of EndoS2. Furthermore, hydrolytic experiments, domain-swap chimeras, and hydrogen-deuterium exchange mass spectrometry reveal the importance of the carbohydrate-binding module in the mechanism of IgG recognition by EndoS2, providing insights into engineering enzymes to catalyze customizable glycosylation reactions.
-
Authors: Klontz, E.H., Trastoy, B., Gunther, S., Guerin, M.E., Sundberg, E.J.
+
Molecular Basis of Broad Spectrum N-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2.,Klontz EH, Trastoy B, Deredge D, Fields JK, Li C, Orwenyo J, Marina A, Beadenkopf R, Gunther S, Flores J, Wintrode PL, Wang LX, Guerin ME, Sundberg EJ ACS Cent Sci. 2019 Mar 27;5(3):524-538. doi: 10.1021/acscentsci.8b00917. Epub, 2019 Feb 6. PMID:30937380<ref>PMID:30937380</ref>
-
Description: Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2)
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 6e58" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Streptococcus pyogenes m49 591]]
 +
[[Category: Guerin, M E]]
[[Category: Gunther, S]]
[[Category: Gunther, S]]
 +
[[Category: Klontz, E H]]
 +
[[Category: Sundberg, E J]]
[[Category: Trastoy, B]]
[[Category: Trastoy, B]]
-
[[Category: Sundberg, E.J]]
+
[[Category: Endo-beta-n-acetylglucosaminidase s2]]
-
[[Category: Klontz, E.H]]
+
[[Category: Endoglycosidase s2]]
-
[[Category: Guerin, M.E]]
+
[[Category: Endos2]]
 +
[[Category: Glycoside hydrolase]]
 +
[[Category: Hydrolase]]

Revision as of 06:47, 17 April 2019

Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2)

PDB ID 6e58

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools