Cadherin
From Proteopedia
(Difference between revisions)
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</StructureSection> | </StructureSection> | ||
| - | == 3D Structures of Cadherin == | ||
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| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
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| - | * CDH5 | ||
| - | |||
| - | **[[2koh]] – mCDH5+PAR3-PDZ3 - mouse<br /> | ||
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| - | * CDH6 | ||
| - | |||
| - | **[[3lnd]] – mCDH6 EC12 (mutant)<br /> | ||
| - | |||
| - | *CDH encoded by CDH7 | ||
| - | |||
| - | **[[6cgs]] – mCDH7 EC1-EC2<br /> | ||
| - | |||
| - | * CDH8 | ||
| - | |||
| - | **[[1zxk]] – mCDH8 EC1<br /> | ||
| - | **[[2a62]] - mCDH8 EC1-EC3<br /> | ||
| - | |||
| - | * CDH11 | ||
| - | |||
| - | **[[2a4c]], [[2a4e]] – mCDH11 EC1<br /> | ||
| - | **[[6cgb]] - mCDH11 EC1/CDH6 EC2<br /> | ||
| - | |||
| - | * CDH20 | ||
| - | |||
| - | **[[1zvn]] – cCDH20 EC1 – chicken<br /> | ||
| - | |||
| - | *CDH encoded by CDH22 | ||
| - | |||
| - | **[[6cg7]] – mCDH20 EC1-EC2<br /> | ||
| - | |||
| - | * CDH23 | ||
| - | |||
| - | **[[3mvs]], [[2whv]] – mCDH23 N-terminal<br /> | ||
| - | **[[2kbr]] – hCDH23 peptide+harmonin – NMR - human<br /> | ||
| - | **[[2kbs]] - hCDH23 C-terminal peptide+harmonin PDZ2 – NMR<br /> | ||
| - | **[[2wbx]] – mCDH23 EC1<br /> | ||
| - | **[[2wcp]] - mCDH23 EC2<br /> | ||
| - | **[[2wd0]] - mCDH23 EC1-EC2 (mutant)<br /> | ||
| - | **[[5w4t]] - CDH23 EC1-EC3 - zebrafish<br /> | ||
| - | **[[5tfm]] - mCDH23 EC6-EC8<br /> | ||
| - | **[[5tfl]] - mCDH23 EC7-EC8<br /> | ||
| - | **[[5vh2]] - mCDH23 EC12-EC13 (mutant)<br /> | ||
| - | **[[5wj8]] - hCDH23 EC13-EC14<br /> | ||
| - | **[[5wjm]] - mCDH23 EC17-EC18<br /> | ||
| - | **[[5tfk]] - mCDH23 EC19-EC21<br /> | ||
| - | **[[5i8d]], [[5ulu]], [[5un2]] - mCDH23 EC19-EC21 (mutant)<br /> | ||
| - | **[[5vvm]] - hCDH23 EC21-EC23<br /> | ||
| - | **[[5uz8]] - mCDH23 EC22-EC24<br /> | ||
| - | **[[5vt8]] - mCDH23 EC23-EC25<br /> | ||
| - | **[[4apx]], [[4aq8]], [[4axw]], [[4xxw]] - mCDH23 EC1-EC2 + Prot-CDH15<br /> | ||
| - | **[[4aqa]], [[4aqe]] - mCDH23 EC1-EC2 (mutant) + Prot-CDH15 | ||
| - | |||
| - | * C-CDH “classical” | ||
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| - | **[[1l3w]] – XlC-CDH ectodomain - ''Xenopus laevis''<br /> | ||
| - | **[[1q5b]], [[1q5c]], [[1q55]], [[1q5a]] – C-CDH model into desmosome – electron tomography<br /> | ||
| - | |||
| - | * E-CDH epithelial or CDH1 | ||
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| - | **[[1q1p]], [[1ff5]], [[1edh]], [[3lne]], [[3lnf]], [[3lng]], [[3lnh]], [[3lni]], [[2qvf]] – mE-CDH EC1-EC2<br /> | ||
| - | **[[3q2v]] – mE-CDH ectodomain<br /> | ||
| - | **[[4zt1]], [[2o72]] – hE-CDH EC1-EC2<br /> | ||
| - | **[[4zte]] – hE-CDH EC1-EC2 + inhibitor<br /> | ||
| - | **[[6fek]] – hE-CDH EC1-EC2 + antibody<br /> | ||
| - | **[[1edh]] - mE-CDH EC1-EC2+Ca<br /> | ||
| - | **[[3q2l]], [[3q2n]], [[3qrb]] - mE-CDH EC1-EC2 (mutant)<br /> | ||
| - | **[[1suh]] – mE-CDH N-terminal - NMR<br /> | ||
| - | **[[1i7x]], [[1i7w]] – mE-CDH cytoplasmic domain +catenin<br /> | ||
| - | **[[4qd2]] – mE-CDH + botulinum neurotoxin<br /> | ||
| - | **[[3ifq]] – hE-CDH EC1-EC3 <br /> | ||
| - | **[[3ff7]], [[3ff8]] - hE-CDH EC1-EC3+NK cell receptor<br /> | ||
| - | **[[2omt]], [[2omu]], [[2omx]], [[2omz]], [[2omv]], [[2omw]], [[2omy]] – hE-CDH EC1+internalin (mutant)<br /> | ||
| - | **[[1o6s]] – E-CDH N-terminal+internalin – ''Listeria monocytogenes''<br /> | ||
| - | **[[4qd2]] – mE-CDH + botulinum neurotoxin<br /> | ||
| - | |||
| - | *K-CDH kidney or CDH6 | ||
| - | |||
| - | **[[5veb]] – hK-CDH EC5 + antibody<br /> | ||
| - | **[[6cgu]] – mK-CDH EC1-EC2 <br /> | ||
| - | |||
| - | * T-CDH membrane bound | ||
| - | |||
| - | **[[3k5r]], [[6cg6]] – mT-CDH EC1-EC2<br /> | ||
| - | **[[3k5s]] - cT-CDH EC1-EC2 <br /> | ||
| - | **[[3k6d]] - XlT-CDH EC1 <br /> | ||
| - | **[[3k6f]] - mT-CDH EC1<br /> | ||
| - | **[[3k6i]] - cT-CDH EC1<br /> | ||
| - | **[[2v37]] – hT-CDH N-terminal - NMR<br /> | ||
| - | |||
| - | * N-CDH neuronal | ||
| - | |||
| - | **[[1nch]], [[1nci]] – mN-CDH<br /> | ||
| - | **[[1ncg]] – mN-CDH (mutant)<br /> | ||
| - | **[[2qvi]], [[4nuq]] – mN-CDH EC1-EC2<br /> | ||
| - | **[[4num]], [[4nup]] – mN-CDH EC1-EC2 (mutant)<br /> | ||
| - | **[[1ncj]] – mN-CDH two domains<br /> | ||
| - | **[[3q2w]] – mN-CDH ectodomain<br /> | ||
| - | **[[1op4]] - mN-CDH prodomain - NMR<br /> | ||
| - | **[[3ubf]] – DmN-CDH ectodomain – ''Drosophila melanogaster''<br /> | ||
| - | **[[3ubh]] - DmN-CDH EC1-EC4<br /> | ||
| - | **[[3ubg]] - DmN-CDH EC1-EC3 | ||
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| - | *P-CDH placental or CDH3 | ||
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| - | **[[4nqq]] – mP-CDH EC1-EC2<br /> | ||
| - | **[[4oy9]], [[4zml]], [[4zmn]], [[4zmq]], [[4zmt]], [[4zmw]], [[4zmz]] – hP-CDH EC1-EC2<br /> | ||
| - | **[[4zmo]], [[4zmp]], [[4zmv]], [[4zmx]], [[4zmy]] – hP-CDH EC1-EC2 (mutant)<br /> | ||
| - | **[[5jyl]], [[5jym]] – hP-CDH EC1-EC2 + SCFV TSP7<br /> | ||
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| - | *VE-CDH vascular epithelial | ||
| - | |||
| - | **[[3ppe]] – cVE-CDH EC1+EC2<br /> | ||
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| - | * Protocadherin | ||
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| - | **[[6bx7]] - hProt-CDH1 EC1-EC4<br /> | ||
| - | **[[2yst]] – hProt-CDH7 EC3 – NMR<br /> | ||
| - | **[[2ee0]] - hProt-CDH9 Ca domain – NMR<br /> | ||
| - | **[[1wyj]] - mProt-CDH β 14 - NMR<br /> | ||
| - | **[[1wuz]] - mProt-CDH4 EC1 – NMR<br /> | ||
| - | **[[5cyx]] - mProt-CDH2 EC1+EC2+EC3<br /> | ||
| - | **[[5szl]] - mProt-CDH γ A1 EC1-EC4<br /> | ||
| - | |||
| - | * Desmoglein | ||
| - | |||
| - | **[[2yqg]] – hDes-CDH2 EC1<br /> | ||
| - | **[[5erd]] – hDes-CDH2 ectodomain<br /> | ||
| - | **[[5eqx]] – hDes-CDH3 ectodomain<br /> | ||
| - | **[[6qnt]], [[6qnu]] – hDesmc2 ectodomain + adenovirus fiber protein – Cryo EM<br /> | ||
| - | |||
| - | *Desmocollin | ||
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| - | **[[5iry]] – hDesmc1 ectodomain<br /> | ||
| - | **[[5erp]], [[5j5j]] – hDesmc2 ectodomain<br /> | ||
| - | |||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 10:33, 18 April 2019
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References
- ↑ Angst BD, Marcozzi C, Magee AI. The cadherin superfamily: diversity in form and function. J Cell Sci. 2001 Feb;114(Pt 4):629-41. PMID:11171368
- ↑ Patel SD, Ciatto C, Chen CP, Bahna F, Rajebhosale M, Arkus N, Schieren I, Jessell TM, Honig B, Price SR, Shapiro L. Type II cadherin ectodomain structures: implications for classical cadherin specificity. Cell. 2006 Mar 24;124(6):1255-68. PMID:16564015 doi:http://dx.doi.org/10.1016/j.cell.2005.12.046
