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4ruc

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==Crystal structure of Y-family DNA polymerase Dpo4 extending from a MeFapy-dG:dC pair==
==Crystal structure of Y-family DNA polymerase Dpo4 extending from a MeFapy-dG:dC pair==
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<StructureSection load='4ruc' size='340' side='right' caption='[[4ruc]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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<StructureSection load='4ruc' size='340' side='right'caption='[[4ruc]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4ruc]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RUC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RUC FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4ruc]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sacs2 Sacs2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RUC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RUC FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTP:2-DEOXYADENOSINE+5-TRIPHOSPHATE'>DTP</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTP:2-DEOXYADENOSINE+5-TRIPHOSPHATE'>DTP</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MF7:N-{2-AMINO-5-[FORMYL(METHYL)AMINO]-6-HYDROXYPYRIMIDIN-4-YL}-2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYLAMINE'>MF7</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MF7:N-{2-AMINO-5-[FORMYL(METHYL)AMINO]-6-HYDROXYPYRIMIDIN-4-YL}-2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYLAMINE'>MF7</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ru9|4ru9]], [[4rua|4rua]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ru9|4ru9]], [[4rua|4rua]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dbh, dpo4, SSO2448 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273057 SACS2])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ruc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ruc OCA], [http://pdbe.org/4ruc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ruc RCSB], [http://www.ebi.ac.uk/pdbsum/4ruc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ruc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ruc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ruc OCA], [http://pdbe.org/4ruc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ruc RCSB], [http://www.ebi.ac.uk/pdbsum/4ruc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ruc ProSAT]</span></td></tr>
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</div>
</div>
<div class="pdbe-citations 4ruc" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4ruc" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[DNA polymerase|DNA polymerase]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: DNA-directed DNA polymerase]]
[[Category: DNA-directed DNA polymerase]]
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[[Category: Large Structures]]
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[[Category: Sacs2]]
[[Category: Banerjee, S]]
[[Category: Banerjee, S]]
[[Category: Egli, M]]
[[Category: Egli, M]]

Revision as of 10:26, 1 May 2019

Crystal structure of Y-family DNA polymerase Dpo4 extending from a MeFapy-dG:dC pair

PDB ID 4ruc

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