2j8x
From Proteopedia
(Difference between revisions)
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| - | == | + | |
| - | <StructureSection load='2j8x' size='340' side='right' caption='[[2j8x]], [[Resolution|resolution]] 2.30Å' scene=''> | + | ==Epstein-Barr virus uracil-DNA glycosylase in complex with Ugi from PBS-2== |
| + | <StructureSection load='2j8x' size='340' side='right'caption='[[2j8x]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2j8x]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bppb2 Bppb2] and [http://en.wikipedia.org/wiki/Ebvg Ebvg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J8X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J8X FirstGlance]. <br> | <table><tr><td colspan='2'>[[2j8x]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bppb2 Bppb2] and [http://en.wikipedia.org/wiki/Ebvg Ebvg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J8X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J8X FirstGlance]. <br> | ||
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1eui|1eui]], [[1lqg|1lqg]], [[1lqm|1lqm]], [[1udi|1udi]], [[1ugh|1ugh]], [[1ugi|1ugi]], [[1uug|1uug]], [[2ugi|2ugi]], [[2uug|2uug]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1eui|1eui]], [[1lqg|1lqg]], [[1lqm|1lqm]], [[1udi|1udi]], [[1ugh|1ugh]], [[1ugi|1ugi]], [[1uug|1uug]], [[2ugi|2ugi]], [[2uug|2uug]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_nucleosidase Uridine nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.3 3.2.2.3] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_nucleosidase Uridine nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.3 3.2.2.3] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j8x OCA], [http://pdbe.org/2j8x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j8x RCSB], [http://www.ebi.ac.uk/pdbsum/2j8x PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j8x OCA], [http://pdbe.org/2j8x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j8x RCSB], [http://www.ebi.ac.uk/pdbsum/2j8x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2j8x ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/2j8x_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/2j8x_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j8x ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
*[[DNA glycosylase|DNA glycosylase]] | *[[DNA glycosylase|DNA glycosylase]] | ||
| - | *[[Uracil | + | *[[Uracil glycosylase inhibitor|Uracil glycosylase inhibitor]] |
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| - | + | ||
== References == | == References == | ||
<references/> | <references/> | ||
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[[Category: Bppb2]] | [[Category: Bppb2]] | ||
[[Category: Ebvg]] | [[Category: Ebvg]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Uridine nucleosidase]] | [[Category: Uridine nucleosidase]] | ||
[[Category: Buisson, M]] | [[Category: Buisson, M]] | ||
Revision as of 12:05, 10 May 2019
Epstein-Barr virus uracil-DNA glycosylase in complex with Ugi from PBS-2
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