6jdj

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'''Unreleased structure'''
 
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The entry 6jdj is ON HOLD until Paper Publication
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==Crystal structure of AcrIIC2 dimer in complex with partial Nme1Cas9==
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<StructureSection load='6jdj' size='340' side='right'caption='[[6jdj]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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Authors:
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6jdj]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Neim8 Neim8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JDJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6JDJ FirstGlance]. <br>
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Description:
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CIJ84_02100 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=604162 NEIM8]), cas9, NMV_1993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=604162 NEIM8])</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6jdj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jdj OCA], [http://pdbe.org/6jdj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jdj RCSB], [http://www.ebi.ac.uk/pdbsum/6jdj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jdj ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/CAS9_NEIM8 CAS9_NEIM8]] CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein, although RNase 3 is not required for 5'-processing of crRNA in this strain. Cas9/crRNA/tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer; Cas9 is inactive in the absence of the 2 guide RNAs (gRNA, PubMed:23940360). Cas9 recognizes the protospacer adjacent motif (PAM) in the CRISPR repeat sequences to help distinguish self versus nonself, as targets within the bacterial CRISPR locus do not have PAMs. PAM recognition is also required for catalytic activity. Plasmids containing sequences homologous to endogenous spacer elements and that have flanking PAM consensus sequences cannot transform this strain unless the cas9 gene is disrupted or critical residues of Cas9 are mutated.<ref>PMID:23706818</ref> <ref>PMID:23940360</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Neim8]]
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[[Category: Cheng, Z]]
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[[Category: Huang, X]]
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[[Category: Sun, W]]
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[[Category: Wang, Y]]
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[[Category: Acriic2]]
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[[Category: Anti-crispr]]
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[[Category: Crispr-cas9]]
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[[Category: Hydrolase-hydrolase inhibitor complex]]
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[[Category: Nme1cas9]]
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[[Category: Nmecas9]]

Revision as of 07:29, 21 May 2019

Crystal structure of AcrIIC2 dimer in complex with partial Nme1Cas9

PDB ID 6jdj

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