D-alanine-D-alanine ligase
From Proteopedia
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</StructureSection> | </StructureSection> | ||
| - | ==3D structures of D-alanine-D-alanine ligase== | ||
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| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
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| - | *D-alanine-D-alanine ligase | ||
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| - | **[[2fb9]] – DDL – ''Thermus caldophilus'' <br /> | ||
| - | **[[2yzg]] – TtDDL – ''Thermus thermophilus'' <br /> | ||
| - | **[[2i80]], [[2i87]] – SaDDL – ''Staphylococcus aureus'' <br /> | ||
| - | **[[2pvp]] – DDL – ''Helicobacter pylori'' <br /> | ||
| - | **[[3e5n]] – XoDDL – ''Xanthomonas oryzae''<br /> | ||
| - | **[[3lwb]] – DDL – ''Mycobacterium tuberculosis''<br /> | ||
| - | **[[3k3p]] – DDL – ''Streptococcus mutans'' <br /> | ||
| - | **[[3r23]] – BaDDL – ''Bacillus anthracis'' <br /> | ||
| - | **[[3tqt]] – DDL – ''Coxiella burnetii''<br /> | ||
| - | **[[3v4z]], [[4zqi]] – DDL – ''Yersinia pestis'' <br /> | ||
| - | **[[4egq]] – BpDDL – ''Burkholderia pseudomallei'' <br /> | ||
| - | **[[4egj]] – DDL – ''Burkholderia xenovorans'' <br /> | ||
| - | **[[4eg0]] – DDL – ''Burkholderia ambifaria'' <br /> | ||
| - | **[[2dln]] - EcDDL – ''Escherichia coli''<br /> | ||
| - | **[[3i12]] – StDDL – ''Salmonella typhimurium''<br /> | ||
| - | **[[5d8d]], [[5dmx]] – DDL – ''Acinetobacter baumannii'' <br /> | ||
| - | **[[6dgi]] – DDL – Vibrio cholerae <br /> | ||
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| - | *D-alanine-D-alanine ligase binary complex | ||
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| - | **[[2i8c]] – SaDDL + ADP <br /> | ||
| - | **[[3n8d]] – SaDDL (mutant) + ANP <br /> | ||
| - | **[[2zdg]] – TtDDL + ADP <br /> | ||
| - | **[[2yzm]] – TtDDL + D-alanine <br /> | ||
| - | **[[2yzn]] – TtDDL + AMPPNP <br /> | ||
| - | **[[3r5x]] – BaDDL + ATP <br /> | ||
| - | **[[3q1k]] – StDDL + ADP <br /> | ||
| - | **[[5bpf]] – YpDDL + ADP <br /> | ||
| - | **[[5bph]] – YpDDL + AMP <br /> | ||
| - | **[[5c1o]] – YpDDL + AMPPNP <br /> | ||
| - | **[[5nrh]] – BpDDL + AMP <br /> | ||
| - | **[[4fu0]] – DDL + ADP – ''Enterococcus faecalis''<br /> | ||
| - | **[[4l1k]] – XoDDL + AMPPNP <br /> | ||
| - | **[[4me6]] – XoDDL (mutant) + ADP <br /> | ||
| - | **[[3rfc]] – XoDDL (mutant) + ADP <br /> | ||
| - | **[[3r5f]] – XoDDL (mutant) + ATP <br /> | ||
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| - | *D-alanine-D-alanine ligase ternary complex | ||
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| - | **[[2zdh]] – TtDDL + D-alanine + ADP<br /> | ||
| - | **[[2zdq]] – TtDDL + D-alanine + ATP<br /> | ||
| - | **[[5nri]] – BpDDL + D-alanine-D-alanine + AMP<br /> | ||
| - | **[[5c1p]] – YpDDL + D-alanine-D-alanine + ADP<br /> | ||
| - | **[[1iov]] – EcDDL + ADP + phosphoryl phosphonate <br /> | ||
| - | **[[1iow]] – EcDDL (mutant) + ADP + phosphoryl phosphonate <br /> | ||
| - | **[[4c5a]] – EcDDL + ADP + cycloserine phosphate + peptide<br /> | ||
| - | **[[4c5b]], [[4c5c]] – EcDDL + D-alanine-D-alanine + ADP<br /> | ||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
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References
- ↑ Fan C, Moews PC, Walsh CT, Knox JR. Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 A resolution. Science. 1994 Oct 21;266(5184):439-43. PMID:7939684
- ↑ Liu S, Chang JS, Herberg JT, Horng MM, Tomich PK, Lin AH, Marotti KR. Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies. Proc Natl Acad Sci U S A. 2006 Oct 10;103(41):15178-83. Epub 2006 Oct 2. PMID:17015835
