6qlv
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of W200H UbiX in complex with a geranyl-FMN N5 adduct== | |
| - | + | <StructureSection load='6qlv' size='340' side='right'caption='[[6qlv]], [[Resolution|resolution]] 2.39Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[6qlv]] is a 12 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QLV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6QLV FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=HJN:[(2~{R},3~{S},4~{S})-5-[5-[(2~{Z})-3,7-dimethylocta-2,6-dienyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl]+dihydrogen+phosphate'>HJN</scene>, <scene name='pdbligand=HZZ:[(2~{Z})-3,7-dimethylocta-2,6-dienyl]+dihydrogen+phosphate'>HZZ</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | [[Category: | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Flavin_prenyltransferase Flavin prenyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.129 2.5.1.129] </span></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6qlv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qlv OCA], [http://pdbe.org/6qlv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qlv RCSB], [http://www.ebi.ac.uk/pdbsum/6qlv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qlv ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/A0A072ZCW8_PSEAI A0A072ZCW8_PSEAI]] Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.[HAMAP-Rule:MF_01984] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Flavin prenyltransferase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Leys, D]] | [[Category: Leys, D]] | ||
| - | [[Category: Marshall, S | + | [[Category: Marshall, S A]] |
| + | [[Category: Transferase]] | ||
| + | [[Category: Ubix prenyltransferase flavin binding]] | ||
Revision as of 22:55, 5 June 2019
Crystal structure of W200H UbiX in complex with a geranyl-FMN N5 adduct
| |||||||||||
