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Dihydropteroate synthase
From Proteopedia
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<StructureSection load='1tws' size='350' side='right' scene='' caption='Dihydropteroate synthase complex with sulfate (PDB code [[1tws]])'> | <StructureSection load='1tws' size='350' side='right' scene='' caption='Dihydropteroate synthase complex with sulfate (PDB code [[1tws]])'> | ||
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| + | __TOC__ | ||
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| + | ==Function== | ||
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'''Dihydropteroate synthase''' (DHPS) catalyzes the condensation of 6-hydroxymethyl-7,8-dihydropteridine pyrophosphate to para-aminobenzoic acid (PABA) to form 7,8-dihydropteroate. DHPs is a key enzyme in folate synthesis. Folate is necessary for nucleic acid synthesis. DHPS is found in bacteria and not in eukaryotes. Hence, it makes a target to sulfonamide antibiotics<ref>PMID:10329458</ref> Some DHPS contain a dihydro-6-hydroxymethylpterin pyrophosphokinase domain at their N terminal and are named PPPK-DHPS. | '''Dihydropteroate synthase''' (DHPS) catalyzes the condensation of 6-hydroxymethyl-7,8-dihydropteridine pyrophosphate to para-aminobenzoic acid (PABA) to form 7,8-dihydropteroate. DHPs is a key enzyme in folate synthesis. Folate is necessary for nucleic acid synthesis. DHPS is found in bacteria and not in eukaryotes. Hence, it makes a target to sulfonamide antibiotics<ref>PMID:10329458</ref> Some DHPS contain a dihydro-6-hydroxymethylpterin pyrophosphokinase domain at their N terminal and are named PPPK-DHPS. | ||
| - | + | == Insights into the drug resistance induced by the BaDHPS mutations: molecular dynamic simulations and MM/GBSA studies <ref>doi 10.1080/07391102.2012.726529</ref>== | |
Drug resistance has been an urgent problem that severely limits the therapy of current clinical microbial diseases. Sometimes, it generally correlates with mutations to the dihydropteroate synthase (DHPS) gene. | Drug resistance has been an urgent problem that severely limits the therapy of current clinical microbial diseases. Sometimes, it generally correlates with mutations to the dihydropteroate synthase (DHPS) gene. | ||
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</StructureSection> | </StructureSection> | ||
| - | ==3D structures of dihydropteroate synthase== | ||
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| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
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| - | *DHPS | ||
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| - | **[[1ad1]], [[4hb7]] – SaDHPS - ''Staphylococcus aureus'' <br /> | ||
| - | **[[6clu]], [[6clv]] - SaDHPS (mutant)<br /> | ||
| - | **[[1ajz]] – EcDHPS – ''Escherichia coli''<br /> | ||
| - | **[[1tws]], [[3v5o]] – BaDHPS – ''Bacillus anthracis''<br /> | ||
| - | **[[2dqw]] - TtDHPS – ''Thermus thermophilus''<br /> | ||
| - | **[[2vef]] - SpDHPS – ''Streptococcus pneumoniae''<br /> | ||
| - | **[[2vp8]] – MtDHPS – ''Mycobacterium tuberculosis''<br /> | ||
| - | **[[2y5j]] – BcDHPS – ''Burkholderia cenocepacia''<br /> | ||
| - | **[[3tzn]] – YpDHPS – ''Yersinia pestis''<br /> | ||
| - | **[[4o0q]] – DhDHPS – ''Desulfitobacterium hafniense''<br /> | ||
| - | **[[5umg]] - DHPS – ''Klebsiella pneumoniae''<br /> | ||
| - | **[[5usw]] - DHPS – ''Vibrio fischeri''<br /> | ||
| - | **[[5vis]] - DHPS – soil metagenome<br /> | ||
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| - | *DHPS binary complexes | ||
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| - | **[[1ad4]] – SaDHPS + pterin-pyrophosphate<br /> | ||
| - | **[[1aj2]] – EcDHPS + dihydro-pterin-methanyl-phosphonophosphate<br /> | ||
| - | **[[5u0v]] - EcDHPS + nitrosoisocytosine inhibitor<br /> | ||
| - | **[[5u0w]], [[5u0y]], [[5u0z]], [[5u11]], [[5u12]], [[5u13]], [[5u14]], [[5v79]], [[5v7a]] - EcDHPS + guanine inhibitor<br /> | ||
| - | **[[5u10]] - EcDHPS + pteroic acid inhibitor<br /> | ||
| - | **[[1eye]] - MtDHPS + pterin-methyl-phosphate<br /> | ||
| - | **[[1tww]] - BaDHPS + hydroxymethylpterin-diphosphate<br /> | ||
| - | **[[1twz]] - BaDHPS + pterin-methyl-phosphate<br /> | ||
| - | **[[1tx0]] - BaDHPS + pteroic acid<br /> | ||
| - | **[[1tx2]], [[3h21]], [[3h22]], [[3h23]], [[3h24]], [[3h26]], [[3h2a]], [[3h2c]], [[3h2e]], [[3h2f]], [[3h2m]], [[3h2n]], [[3h2o]], [[4d8z]], [[4d9p]], [[4dai]], [[4db7]], [[4d8a]], [[4daf]], [[4nhv]], [[4nil]], [[4nir]], [[4nl1]] - BaDHPS + inhibitor<br /> | ||
| - | **[[2dza]] - TtDHPS + PABA<br /> | ||
| - | **[[2dzb]] - TtDHPS + hydroxymethylpterin-diphosphate<br /> | ||
| - | **[[2veg]] - SpDHPS + pterin-methyl-phosphate<br /> | ||
| - | **[[2y5s]] - BcDHPS + dihydro-pteroate<br /> | ||
| - | **[[3tya]] - BaDHPS + dihydro-pteroate<br /> | ||
| - | **[[3tyc]] - BaDHPS + amino-hydroxymethyl-dihydro-pteridinone<br /> | ||
| - | **[[3tr9]] - DHPS + pteroic acid – ''Coxiella burnetii''<br /> | ||
| - | **[[3tyu]] – YpDHPS + pteroic acid <br /> | ||
| - | **[[5jq9]] - YpDHPS + sulfonamide inhibitor<br /> | ||
| - | **[[4o1e]], [[4o1f]] – DhDHPS + tetrahydrofolate derivative<br /> | ||
| - | **[[6day]] - DHPS + PABA – ''Xanthomonas albilineans''<br /> | ||
| - | **[[6omz]] - DHPS + pterin-monophosphate – ''Mycobacterium smegmatis''<br /> | ||
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| - | *DHPS ternary complexes | ||
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| - | **[[1aj0]] – EcDHPS + sulfanilamide + amino-methyldiene-dihydro-pteridinone<br /> | ||
| - | **[[3tyb]] - BaDHPS + hydroxybenzoic acid + amino-hydroxymethyl-dihydro-pteridinone<br /> | ||
| - | **[[3tyd]] - BaDHPS + pyrophosphate+ amino-hydroxymethyl-dihydro-pteridinone<br /> | ||
| - | **[[3tye]] - BaDHPS + sulfa derivative + amino-hydroxymethyl-dihydro-pteridinone<br /> | ||
| - | **[[3tyz]] - YpDHPS + pyrophosphate + PABA + amino-hydroxymethyl-dihydro-pteridinone<br /> | ||
| - | **[[3tzf]] - YpDHPS + sulfa derivative + hydroxymethylpterin-diphosphate<br /> | ||
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| - | *Bifunctional 6-hydroxymethyl-7,8-dihydropterin pyrophsphokinase-DHPS | ||
| - | + | ==References== | |
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<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:15, 10 June 2019
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References
- ↑ Vinnicombe HG, Derrick JP. Dihydropteroate synthase from Streptococcus pneumoniae: characterization of substrate binding order and sulfonamide inhibition. Biochem Biophys Res Commun. 1999 May 19;258(3):752-7. doi:, 10.1006/bbrc.1999.0695. PMID:10329458 doi:http://dx.doi.org/10.1006/bbrc.1999.0695
- ↑ Chu WT, Zhang JL, Zheng QC, Chen L, Xue Q, Zhang HX. Insights into the drug resistance induced by the BaDHPS mutations: molecular dynamic simulations and MM/GBSA studies. J Biomol Struct Dyn. 2012 Oct 2. PMID:23030549 doi:10.1080/07391102.2012.726529

