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4ygd
From Proteopedia
(Difference between revisions)
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==Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 2== | ==Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 2== | ||
| - | <StructureSection load='4ygd' size='340' side='right' caption='[[4ygd]], [[Resolution|resolution]] 2.51Å' scene=''> | + | <StructureSection load='4ygd' size='340' side='right'caption='[[4ygd]], [[Resolution|resolution]] 2.51Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4ygd]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YGD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YGD FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4ygd]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YGD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YGD FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ygb|4ygb]], [[4ygc|4ygc]], [[4yge|4yge]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ygb|4ygb]], [[4ygc|4ygc]], [[4yge|4yge]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ygd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ygd OCA], [http://pdbe.org/4ygd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ygd RCSB], [http://www.ebi.ac.uk/pdbsum/4ygd PDBsum]</span></td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LMAN1, ERGIC53, F5F8D ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), MCFD2, SDNSF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ygd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ygd OCA], [http://pdbe.org/4ygd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ygd RCSB], [http://www.ebi.ac.uk/pdbsum/4ygd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ygd ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Disease == | == Disease == | ||
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== Function == | == Function == | ||
[[http://www.uniprot.org/uniprot/LMAN1_HUMAN LMAN1_HUMAN]] Mannose-specific lectin. May recognize sugar residues of glycoproteins, glycolipids, or glycosylphosphatidyl inositol anchors and may be involved in the sorting or recycling of proteins, lipids, or both. The LMAN1-MCFD2 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins.<ref>PMID:13130098</ref> <ref>PMID:12717434</ref> [[http://www.uniprot.org/uniprot/MCFD2_HUMAN MCFD2_HUMAN]] The MCFD2-LMAN1 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins. Plays a role in the secretion of coagulation factors.<ref>PMID:12717434</ref> | [[http://www.uniprot.org/uniprot/LMAN1_HUMAN LMAN1_HUMAN]] Mannose-specific lectin. May recognize sugar residues of glycoproteins, glycolipids, or glycosylphosphatidyl inositol anchors and may be involved in the sorting or recycling of proteins, lipids, or both. The LMAN1-MCFD2 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins.<ref>PMID:13130098</ref> <ref>PMID:12717434</ref> [[http://www.uniprot.org/uniprot/MCFD2_HUMAN MCFD2_HUMAN]] The MCFD2-LMAN1 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins. Plays a role in the secretion of coagulation factors.<ref>PMID:12717434</ref> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[ERGIC-53|ERGIC-53]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Human]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Anzai, T]] | [[Category: Anzai, T]] | ||
[[Category: Kamiya, Y]] | [[Category: Kamiya, Y]] | ||
Revision as of 06:49, 12 June 2019
Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 2
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Categories: Human | Large Structures | Anzai, T | Kamiya, Y | Kato, K | Mizushima, T | Nishio, M | Satoh, T | Suzuki, K | Yagi-Utsumi, M | Beta-sandwich | Calcium binding | Cargo receptor | Ef-hand | Er | Ergic | Protein transport
