Epoxide hydrolase

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 20: Line 20:
</StructureSection>
</StructureSection>
-
== 3D Structures of epoxide hydrolase==
 
- 
-
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 
-
{{#tree:id=OrganizedByTopic|openlevels=0|
 
- 
-
*Epoxide hydrolase
 
- 
-
**[[2e3j]] – EH B – ''Mycobacterium tuberculosis''<br />
 
-
**[[1qo7]], [[3g02]] – AnEH (mutant) – ''Aspergillus niger''<br />
 
-
**[[2cjp]] – pEH I – potato<br />
 
-
**[[3cxu]], [[4ufn]], [[4ufo]], [[4ufp]], [[4uhb]], [[4y9s]] – pEH (mutant) <br />
 
-
**[[4i19]], [[4qa9]], [[5f4z]] – EH – ''Streptomyces carzinostaticus''<br />
 
-
**[[4qla]] – EH – silkworm<br />
 
-
**[[5cxo]] – EH – ''Streptomyces albus''<br />
 
-
**[[5nfq]], [[5ng7]] – EH – metagenome<br />
 
-
**[[5xmd]] – mbEH – mung bean<br />
 
-
**[[5y6y]], [[5y5d]], [[5xm6]] – mbEH (mutant)<br />
 
- 
-
*Soluble epoxide hydrolase
 
- 
-
**[[1s8o]], [[3i1y]], [[3i28]], [[3koo]], [[5ahx]], [[5fp0]] – hSEH – human<br />
 
-
**[[6i5e]] – hSEH C terminal<br />
 
-
**[[1cqz]] – mSEH – mouse<br />
 
-
**[[4nzz]] – BmSEH – ''Bacillus megaterium''<br />
 
-
**[[4inz]] – BmSEH (mutant) <br />
 
-
**[[1ehy]] – SEH – ''Agrobacterium tumefaciens''<br />
 
- 
-
*Epoxide hydrolase complex with inhibitor
 
- 
-
**[[3g0i]] – AnEH + valpromide<br />
 
-
**[[3rga]] – SlEH + oxazolidinone inhibitor – ''Streptomyces lasaliensis''<br />
 
-
**[[4rzm]] – SlEH + lasalocid A<br />
 
-
**[[5yb5]] – mbEH (mutant) + styrene derivative<br />
 
- 
-
*Soluble epoxide hydrolase complex with inhibitor
 
- 
-
**[[1vj5]], [[1zd2]], [[1zd3]], [[1zd4]], [[1zd5]], [[3wk4]], [[4c4x]], [[4c4y]], [[4c4z]], [[5ai5]], [[5akz]], [[5ali]], [[6aum]], [[6fr2]] – hSEH + urea derivative inhibitor<br />
 
-
**[[1cr6]], [[1ek1]], [[1ek2]] – mSEH + urea derivative inhibitor<br />
 
-
**[[3otq]], [[3wk7]], [[4y2j]], [[4y2s]], [[4y2v]], [[5ak4]], [[5akh]], [[5aki]], [[5alk]], [[5alq]], [[5alv]], [[5aly]] – hSEH + pyrazole inhibitor<br />
 
-
**[[5akj]], [[5alf]], [[5als]] – hSEH + imidazole inhibitor<br />
 
-
**[[5akk]], [[5ald]], [[5aln]], [[5alo]], [[5alw]], [[5am4]] – hSEH + indolone inhibitor<br />
 
-
**[[5akx]], [[5aky]] – hSEH + indazole inhibitor<br />
 
-
**[[3wk5]], [[3wk6]], [[3wk8]], [[3wk9]], [[3wkc]], [[5ai8]], [[5aic]], [[5akg]], [[5alg]] – hSEH + thiazole derivative inhibitor<br />
 
-
**[[3ans]], [[3ant]] – hSEH + synthetic inhibitor<br />
 
-
**[[3pdc]], [[5ale]] – hSEH catalytic domain + benzoxazole inhibitor<br />
 
-
**[[4jnc]], [[5alx]] – hSEH catalytic domain + carboxamide inhibitor<br />
 
-
**[[4x6x]], [[4x6y]] – hSEH catalytic domain + cyclopropane inhibitor<br />
 
-
**[[4hai]], [[3wka]], [[4ocz]], [[4od0]], [[5ake]], [[5alh]], [[5am1]] – hSEH + piperidine derivative inhibitor<br />
 
-
**[[4y2p]], [[4y2q]], [[5ai4]], [[5ak5]], [[5ak6]], [[5alt]], [[5am5]] – hSEH + pyridine derivative inhibitor<br />
 
-
**[[4y2r]] – hSEH + piperazine derivative inhibitor<br />
 
-
**[[5akl]], [[5alm]], [[5am0]] – hSEH + pyrrolidine derivative inhibitor<br />
 
-
**[[4y2t]], [[5aib]] – hSEH + benzyloxy derivative inhibitor<br />
 
-
**[[3wkb]] – hSEH + quinoxaline derivative inhibitor<br />
 
-
**[[4y2u]], [[5ai6]], [[5alj]], [[5alr]], [[5am2]] – hSEH + quinoline derivative inhibitor<br />
 
-
**[[4y2x]], [[5alu]], [[5alz]] – hSEH + adamantanyl derivative inhibitor<br />
 
-
**[[4y2y]] – hSEH + etylmethyamine derivative inhibitor<br />
 
-
**[[3wkd]], [[5alp]] – hSEH + morpholine derivative inhibitor<br />
 
-
**[[3wke]], [[5am3]] – hSEH + carbamoyl derivative inhibitor<br />
 
-
**[[4j03]] – hSEH + fulvestrant<br />
 
-
**[[5ai0]] – hSEH + phenyl oxadiazolamine inhibitor<br />
 
-
**[[5ai9]] – hSEH + phenol derivative inhibitor<br />
 
-
**[[5aia]], [[5mwa]] – hSEH + benzoate derivative inhibitor<br />
 
-
**[[5ak3]] – hSEH + indan-amine derivative inhibitor<br />
 
-
**[[5all]] – hSEH + cyclohexyl methanol inhibitor<br />
 
-
**[[6i5g]] – hSEH C terminal + prostaglandin derivative<br />
 
-
**[[4o08]] – BmSEH + phenoxy acetamide inhibitor<br />
 
- 
-
*Soluble epoxide hydrolase complex with product
 
- 
-
**[[4io0]] – BmSEH + naphthyloxy propane diol<br />
 
- 
-
*Limonene-1,2-epoxide hydrolase
 
- 
-
**[[1nww]] – ReEH – ''Rhodococcus erythropolis''<br />
 
-
**[[4r9k]], [[4r9l]], [[4xbx]], [[4xdw]], [[5cf1]], [[5cf2]], [[5jpp]], [[5gkw]] – ReEH (mutant)<br />
 
-
**[[1nu3]] – ReEH + valpromide <br />
 
-
**[[4xbt]], [[4xdv]], [[5clk]], [[5jpu]], [[5yao]] – ReEH (mutant) + hexane derivative<br />
 
-
**[[4xby]], [[5ck6]], [[5yng]], [[5yqt]] – ReEH (mutant) + cyclopentene oxide<br />
 
-
**[[5aif]], [[5aih]], [[5aii]] – mlEH – metagenomic library<br />
 
-
**[[5aig]] – mlEH + valpromide <br />
 
- 
-
}}
 
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 09:11, 23 June 2019

Human soluble epoxide hydrolase complex with imidazole derivative inhibitor (PDB code 5alf)

Drag the structure with the mouse to rotate

References

  1. Biswal BK, Morisseau C, Garen G, Cherney MM, Garen C, Niu C, Hammock BD, James MN. The molecular structure of epoxide hydrolase B from Mycobacterium tuberculosis and its complex with a urea-based inhibitor. J Mol Biol. 2008 Sep 12;381(4):897-912. Epub 2008 Jun 17. PMID:18585390 doi:10.1016/j.jmb.2008.06.030
  2. Arand M, Hallberg BM, Zou J, Bergfors T, Oesch F, van der Werf MJ, de Bont JA, Jones TA, Mowbray SL. Structure of Rhodococcus erythropolis limonene-1,2-epoxide hydrolase reveals a novel active site. EMBO J. 2003 Jun 2;22(11):2583-92. PMID:12773375 doi:http://dx.doi.org/10.1093/emboj/cdg275
  3. Imig JD, Hammock BD. Soluble epoxide hydrolase as a therapeutic target for cardiovascular diseases. Nat Rev Drug Discov. 2009 Oct;8(10):794-805. doi: 10.1038/nrd2875. PMID:19794443 doi:http://dx.doi.org/10.1038/nrd2875
  4. Oster L, Tapani S, Xue Y, Kack H. Successful generation of structural information for fragment-based drug discovery. Drug Discov Today. 2015 Apr 28. pii: S1359-6446(15)00154-3. doi:, 10.1016/j.drudis.2015.04.005. PMID:25931264 doi:http://dx.doi.org/10.1016/j.drudis.2015.04.005

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Personal tools