This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Exportin

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 10: Line 10:
<scene name='59/592125/Cv/12'>Mg coordination site</scene> (PDB code [[3icq]]).<ref>PMID:19680239</ref>
<scene name='59/592125/Cv/12'>Mg coordination site</scene> (PDB code [[3icq]]).<ref>PMID:19680239</ref>
 +
 +
==3D structures of exportin==
 +
[[Exportin 3D structures]]
 +
</StructureSection>
</StructureSection>
Line 32: Line 36:
**[[3wyf]] – yXPO + RAN + RANBP1 <br />
**[[3wyf]] – yXPO + RAN + RANBP1 <br />
**[[3wyg]] – yXPO + RAN + PKI-α<br />
**[[3wyg]] – yXPO + RAN + PKI-α<br />
 +
**[[5zpu]], [[5ytb]], [[5yst]], [[5uro]] - yXPO (mutant) + RAN + RANBP1 + GTP<br />
 +
**[[5ysu]] - yXPO (mutant) + RAN + RANBP1 + GTP + plumbagin<br />
**[[4hau]], [[4hav]], [[4haw]], [[4hax]], [[4hay]], [[4haz]], [[4hb0]], [[4hb3]], [[4hb4]] – yXPO (mutant) + RAN + RANBP1 + antibiotic<br />
**[[4hau]], [[4hav]], [[4haw]], [[4hax]], [[4hay]], [[4haz]], [[4hb0]], [[4hb3]], [[4hb4]] – yXPO (mutant) + RAN + RANBP1 + antibiotic<br />
**[[5dh9]], [[5dha]], [[5dhf]], [[5di9]], [[5uwj]], [[5dif]] - yXPO (mutant) + RAN + RANBP1 + signal peptide<br />
**[[5dh9]], [[5dha]], [[5dhf]], [[5di9]], [[5uwj]], [[5dif]] - yXPO (mutant) + RAN + RANBP1 + signal peptide<br />
**[[5uwo]], [[5uwp]], [[5uwq]], [[5uwr]], [[5uws]], [[5uwt]], [[5uwu]], [[5uww]], [[5uwi]], [[5uwh]] - yXPO + RAN + RANBP1 + signal peptide<br />
**[[5uwo]], [[5uwp]], [[5uwq]], [[5uwr]], [[5uws]], [[5uwt]], [[5uwu]], [[5uww]], [[5uwi]], [[5uwh]] - yXPO + RAN + RANBP1 + signal peptide<br />
 +
**[[6cit]], [[6a38]] - yXPO + RAN + RANBP1 + NS2 peptide<br />
 +
**[[6a3a]], [[6a3b]], [[6a3c]], [[6a3e]] - yXPO (mutant) + RAN + RANBP1 + NS2 peptide<br />
**[[5xoj]] - yXPO (mutant) + GSP1P + PKI-a + NUP42 peptide + GTP<br />
**[[5xoj]] - yXPO (mutant) + GSP1P + PKI-a + NUP42 peptide + GTP<br />
**[[3nby]], [[3nbz]], [[3nc0]] – mXPO + RNA U transporter 1 + RANBP1 - mouse<br />
**[[3nby]], [[3nbz]], [[3nc0]] – mXPO + RNA U transporter 1 + RANBP1 - mouse<br />
Line 51: Line 59:
*XPO-5
*XPO-5
 +
**[[5yu7]] – hXPO <br />
 +
**[[5yu6]] – hXPO + peptide + RAN <br />
**[[3a6p]] – hXPO + peptide + pre-microRNA <br />
**[[3a6p]] – hXPO + peptide + pre-microRNA <br />
}}
}}

Revision as of 09:37, 25 June 2019

Structure of yeast exportin-5 (magenta) complex with GTPaseRan (cyan), Mg+2 (green) and RNA (PDB code 3icq).

Drag the structure with the mouse to rotate

3D structures of exportin

Updated on 25-June-2019

References

  1. Kohler A, Hurt E. Exporting RNA from the nucleus to the cytoplasm. Nat Rev Mol Cell Biol. 2007 Oct;8(10):761-73. PMID:17786152 doi:http://dx.doi.org/10.1038/nrm2255
  2. Cook AG, Fukuhara N, Jinek M, Conti E. Structures of the tRNA export factor in the nuclear and cytosolic states. Nature. 2009 Sep 3;461(7260):60-5. PMID:19680239 doi:10.1038/nature08394

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

Personal tools