Isopentenyl-diphosphate delta-isomerase

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== Structural highlights ==
== Structural highlights ==
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''E. coli'' IPPI contains <scene name='59/595218/Cv/5'>2 divalent ions which interact with the irreversible inhibitor EIPP</scene><ref>PMID:12540835</ref>. Water molecules shown as red spheres.
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''E. coli'' IPPI contains <scene name='59/595218/Cv/8'>2 divalent ions which interact with the irreversible inhibitor EIPP</scene><ref>PMID:12540835</ref>. Water molecules shown as red spheres.
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<scene name='59/595218/Cv/6'>Mg coordination site</scene>.
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<scene name='59/595218/Cv/9'>Mg coordination site</scene>.
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<scene name='59/595218/Cv/7'>Mn coordination site</scene>.
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<scene name='59/595218/Cv/10'>Mn coordination site</scene>.
</StructureSection>
</StructureSection>

Revision as of 09:59, 30 June 2019

Structure of E. coli isopentenyl-diphosphate delta-isomerase complex with EIPP, Mg+2 (green) and Mn+2 (purple) ions and EIPP (PDB code 1nfz).

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3D structures of isopentenyl-diphosphate delta-isomerase

Updated on 30-June-2019

References

  1. Reardon JE, Abeles RH. Mechanism of action of isopentenyl pyrophosphate isomerase: evidence for a carbonium ion intermediate. Biochemistry. 1986 Sep 23;25(19):5609-16. PMID:3022798
  2. Wouters J, Oudjama Y, Barkley SJ, Tricot C, Stalon V, Droogmans L, Poulter CD. Catalytic mechanism of Escherichia coli isopentenyl diphosphate isomerase involves Cys-67, Glu-116, and Tyr-104 as suggested by crystal structures of complexes with transition state analogues and irreversible inhibitors. J Biol Chem. 2003 Apr 4;278(14):11903-8. Epub 2003 Jan 22. PMID:12540835 doi:http://dx.doi.org/10.1074/jbc.M212823200

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Michal Harel, Alexander Berchansky

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