5mi9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure of the phosphomimetic mutant of the elongation factor EF-Tu T62E==
==Structure of the phosphomimetic mutant of the elongation factor EF-Tu T62E==
-
<StructureSection load='5mi9' size='340' side='right' caption='[[5mi9]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
+
<StructureSection load='5mi9' size='340' side='right'caption='[[5mi9]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mi9]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MI9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MI9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mi9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecohs Ecohs]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MI9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MI9 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5mi3|5mi3]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5mi3|5mi3]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tuf1, EcHS_A3535 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=331112 ECOHS])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mi9 OCA], [http://pdbe.org/5mi9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mi9 RCSB], [http://www.ebi.ac.uk/pdbsum/5mi9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mi9 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mi9 OCA], [http://pdbe.org/5mi9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mi9 RCSB], [http://www.ebi.ac.uk/pdbsum/5mi9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mi9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/EFTU1_ECOHS EFTU1_ECOHS]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.[HAMAP-Rule:MF_00118]
[[http://www.uniprot.org/uniprot/EFTU1_ECOHS EFTU1_ECOHS]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.[HAMAP-Rule:MF_00118]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Bacterial protein synthesis is intricately connected to metabolic rate. One of the ways in which bacteria respond to environmental stress is through posttranslational modifications of translation factors. Translation elongation factor Tu (EF-Tu) is methylated and phosphorylated in response to nutrient starvation upon entering stationary phase, and its phosphorylation is a crucial step in the pathway toward sporulation. We analyze how phosphorylation leads to inactivation of Escherichia coli EF-Tu. We provide structural and biophysical evidence that phosphorylation of EF-Tu at T382 acts as an efficient switch that turns off protein synthesis by decoupling nucleotide binding from the EF-Tu conformational cycle. Direct modifications of the EF-Tu switch I region or modifications in other regions stabilizing the beta-hairpin state of switch I result in an effective allosteric trap that restricts the normal dynamics of EF-Tu and enables the evasion of the control exerted by nucleotides on G proteins. These results highlight stabilization of a phosphorylation-induced conformational trap as an essential mechanism for phosphoregulation of bacterial translation and metabolism. We propose that this mechanism may lead to the multisite phosphorylation state observed during dormancy and stationary phase.
 +
 +
Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.,Talavera A, Hendrix J, Versees W, Jurenas D, Van Nerom K, Vandenberk N, Singh RK, Konijnenberg A, De Gieter S, Castro-Roa D, Barth A, De Greve H, Sobott F, Hofkens J, Zenkin N, Loris R, Garcia-Pino A Sci Adv. 2018 Mar 14;4(3):eaap9714. doi: 10.1126/sciadv.aap9714. eCollection 2018, Mar. PMID:29546243<ref>PMID:29546243</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 5mi9" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Elongation factor 3D structures|Elongation factor 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Ecohs]]
 +
[[Category: Large Structures]]
[[Category: Barth, A]]
[[Category: Barth, A]]
[[Category: Castro-Roa, D]]
[[Category: Castro-Roa, D]]

Revision as of 06:26, 3 July 2019

Structure of the phosphomimetic mutant of the elongation factor EF-Tu T62E

PDB ID 5mi9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools