6etz

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==Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB==
==Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB==
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<StructureSection load='6etz' size='340' side='right' caption='[[6etz]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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<StructureSection load='6etz' size='340' side='right'caption='[[6etz]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6etz]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ETZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ETZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6etz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arthrobacter_sp._32cb Arthrobacter sp. 32cb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ETZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ETZ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6etz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6etz OCA], [http://pdbe.org/6etz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6etz RCSB], [http://www.ebi.ac.uk/pdbsum/6etz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6etz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6etz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6etz OCA], [http://pdbe.org/6etz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6etz RCSB], [http://www.ebi.ac.uk/pdbsum/6etz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6etz ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Crystal structures of cold-adapted beta-D-galactosidase (EC 3.2.1.23) from the Antarctic bacterium Arthrobacter sp. 32cB (ArthbetaDG) have been determined in an unliganded form resulting from diffraction experiments conducted at 100K (at resolution 1.8A) and at room temperature (at resolution 3.0A). A detailed comparison of those two structures of the same enzyme was performed in order to estimate differences in their molecular flexibility and rigidity and to study structural rationalization for the cold-adaptation of the investigated enzyme. Furthermore, a comparative analysis with structures of homologous enzymes from psychrophilic, mesophilic, and thermophilic sources has been discussed to elucidate the relationship between structure and cold-adaptation in a wider context. The performed studies confirm that the structure of cold-adapted ArthbetaDG maintains balance between molecular stability and structural flexibility, which can be observed independently on the temperature of conducted X-ray diffraction experiments. Obtained information about proper protein function under given conditions provide a guideline for rational engineering of proteins in terms of their temperature optimum and thermal stability.
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Structural features of cold-adapted dimeric GH2 beta-D-galactosidase from Arthrobacter sp. 32cB.,Rutkiewicz M, Bujacz A, Bujacz G Biochim Biophys Acta Proteins Proteom. 2019 Jun 10. pii: S1570-9639(19)30103-7., doi: 10.1016/j.bbapap.2019.06.001. PMID:31195142<ref>PMID:31195142</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6etz" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Galactosidase|Galactosidase]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Arthrobacter sp. 32cb]]
[[Category: Beta-galactosidase]]
[[Category: Beta-galactosidase]]
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[[Category: Large Structures]]
[[Category: Bujacz, A]]
[[Category: Bujacz, A]]
[[Category: Bujacz, G]]
[[Category: Bujacz, G]]

Revision as of 06:45, 3 July 2019

Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB

PDB ID 6etz

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