2rl9

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[[Image:2rl9.jpg|left|200px]]
[[Image:2rl9.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 2rl9 |SIZE=350|CAPTION= <scene name='initialview01'>2rl9</scene>, resolution 2.400&Aring;
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The line below this paragraph, containing "STRUCTURE_2rl9", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Nag+Binding+Site+For+Residue+A+501'>AC1</scene>, <scene name='pdbsite=AC2:Man+Binding+Site+For+Residue+A+3002'>AC2</scene>, <scene name='pdbsite=AC3:Man+Binding+Site+For+Residue+A+3003'>AC3</scene>, <scene name='pdbsite=AC4:Nag+Binding+Site+For+Residue+B+502'>AC4</scene>, <scene name='pdbsite=AC5:Man+Binding+Site+For+Residue+B+3002'>AC5</scene>, <scene name='pdbsite=AC6:Mn+Binding+Site+For+Residue+A+3000'>AC6</scene>, <scene name='pdbsite=AC7:Mn+Binding+Site+For+Residue+B+3001'>AC7</scene>, <scene name='pdbsite=AC8:M6p+Binding+Site+For+Residue+A+3001'>AC8</scene> and <scene name='pdbsite=AC9:M6p+Binding+Site+For+Residue+B+3004'>AC9</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=M6P:ALPHA-D-MANNOSE-6-PHOSPHATE'>M6P</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE= M6PR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 Bos taurus])
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-->
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02157 Man-6-P_recep]</span>
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{{STRUCTURE_2rl9| PDB=2rl9 | SCENE= }}
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|RELATEDENTRY=[[2rl6|2RL6]], [[2rl7|2RL7]], [[2rl8|2RL8]], [[2rlb|2RLB]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rl9 OCA], [http://www.ebi.ac.uk/pdbsum/2rl9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rl9 RCSB]</span>
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}}
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'''Crystal Structure cation-dependent mannose 6-phosphate receptor at pH 6.5 bound to trimannoside'''
'''Crystal Structure cation-dependent mannose 6-phosphate receptor at pH 6.5 bound to trimannoside'''
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[[Category: Kim, J J.P.]]
[[Category: Kim, J J.P.]]
[[Category: Olson, L J.]]
[[Category: Olson, L J.]]
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[[Category: glycoprotein]]
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[[Category: Glycoprotein]]
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[[Category: lectin]]
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[[Category: Lectin]]
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[[Category: lysosome]]
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[[Category: Lysosome]]
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[[Category: mannose 6-phosphate]]
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[[Category: Mannose 6-phosphate]]
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[[Category: membrane]]
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[[Category: Membrane]]
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[[Category: p-type lectin]]
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[[Category: P-type lectin]]
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[[Category: protein transport]]
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[[Category: Protein transport]]
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[[Category: receptor]]
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[[Category: Receptor]]
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[[Category: sugar binding protein]]
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[[Category: Sugar binding protein]]
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[[Category: transmembrane]]
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[[Category: Transmembrane]]
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[[Category: transport]]
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[[Category: Transport]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 24 09:29:27 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 2 11:32:08 2008''
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Revision as of 06:29, 24 April 2008

Template:STRUCTURE 2rl9

Crystal Structure cation-dependent mannose 6-phosphate receptor at pH 6.5 bound to trimannoside


Overview

The cation-dependent mannose 6-phosphate receptor (CD-MPR) is a key component of the lysosomal enzyme targeting system that binds newly synthesized mannose 6-phosphate (Man-6-P)-containing acid hydrolases and transports them to endosomal compartments. The interaction between the MPRs and its ligands is pH-dependent: the homodimeric CD-MPR binds lysosomal enzymes optimally in the pH environment of the trans Golgi network (TGN) (~pH 6.5) and releases its cargo in acidic endosomal compartments (< pH 5.5) and at the cell surface. In addition, CD-MPR binding affinities are modulated by divalent cations. Our previous crystallographic studies have shown that at pH 6.5, the CD-MPR bound to Man-6-P adopts a significantly different quaternary conformation than the CD-MPR in a ligand-unbound state, a feature unique among known lectin structures. To determine whether different pH conditions elicit conformational changes in the receptor that alters ligand binding affinities, we have obtained additional crystal structures representative of the various environments encountered by the receptor including: 1) the CD-MPR bound at pH 6.5 (i.e., TGN) to a high affinity ligand (the terminally phosphorylated trisaccharide P-Man(a1,2)Man(a1,2)Man-O-(CH(2))(8)COOMe), 2) the CD-MPR at pH 4.8 in an unbound state (i.e., endosome), and 3) the CD-MPR at pH 7.4 (i.e., cell surface). A detailed comparison of the available CD-MPR structures reveals the positional invariability of specific binding pocket residues and implicates inter-monomer contact(s), as well as the protonation state of Man-6-P, as regulators of pH-dependent carbohydrate binding.

About this Structure

2RL9 is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Reference

Structural Insights into the mechanism of pH-dependent ligand binding and release by the cation-dependent mannose 6-phosphate receptor., Olson LJ, Hindsgaul O, Dahms NM, Kim JJ, J Biol Chem. 2008 Feb 13;. PMID:18272523 Page seeded by OCA on Thu Apr 24 09:29:27 2008

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