6p46
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Cryo-EM structure of TMEM16F in digitonin with calcium bound== | |
| + | <StructureSection load='6p46' size='340' side='right'caption='[[6p46]], [[Resolution|resolution]] 3.50Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6p46]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P46 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6P46 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6p46 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p46 OCA], [http://pdbe.org/6p46 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6p46 RCSB], [http://www.ebi.ac.uk/pdbsum/6p46 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6p46 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/ANO6_MOUSE ANO6_MOUSE]] Small-conductance calcium-activated nonselective cation (SCAN) channel which acts as a regulator of phospholipid scrambling in platelets, osteoblasts and fetal thymocytes. Phospholipid scrambling results in surface exposure of phosphatidylserine which in platelets is essential to trigger the clotting system whereas in osteoblasts is essential for the deposition of hydroxyapatite during bone mineralization. Has calcium-dependent phospholipid scramblase activity; scrambles phosphatidylserine, phosphatidylcholine and galactosylceramide. Can generate outwardly rectifying chloride channel currents in airway epithelial cells and Jurkat T lymphocytes.<ref>PMID:21107324</ref> <ref>PMID:21908539</ref> <ref>PMID:22936354</ref> <ref>PMID:23021219</ref> <ref>PMID:23532839</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | As a Ca(2+)-activated lipid scramblase and ion channel that mediates Ca(2+) influx, TMEM16F relies on both functions to facilitate extracellular vesicle generation, blood coagulation, and bone formation. How a bona fide ion channel scrambles lipids remains elusive. Our structural analyses revealed the coexistence of an intact channel pore and PIP2-dependent protein conformation changes leading to membrane distortion. Correlated to the extent of membrane distortion, many tightly bound lipids are slanted. Structure-based mutagenesis studies further reveal that neutralization of some lipid-binding residues or those near membrane distortion specifically alters the onset of lipid scrambling, but not Ca(2+) influx, thus identifying features outside of channel pore that are important for lipid scrambling. Together, our studies demonstrate that membrane distortion does not require open hydrophilic grooves facing the membrane interior and provide further evidence to suggest separate pathways for lipid scrambling and ion permeation. | ||
| - | + | Cryo-EM Studies of TMEM16F Calcium-Activated Ion Channel Suggest Features Important for Lipid Scrambling.,Feng S, Dang S, Han TW, Ye W, Jin P, Cheng T, Li J, Jan YN, Jan LY, Cheng Y Cell Rep. 2019 Jul 9;28(2):567-579.e4. doi: 10.1016/j.celrep.2019.06.023. PMID:31291589<ref>PMID:31291589</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 6p46" style="background-color:#fffaf0;"></div> |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cheng, T]] | ||
[[Category: Cheng, Y]] | [[Category: Cheng, Y]] | ||
| - | [[Category: | + | [[Category: Dang, S]] |
[[Category: Feng, S]] | [[Category: Feng, S]] | ||
| - | [[Category: | + | [[Category: Han, T W]] |
| - | [[Category: | + | [[Category: Jan, L Y]] |
| - | [[Category: | + | [[Category: Jan, Y N]] |
[[Category: Jin, P]] | [[Category: Jin, P]] | ||
| - | [[Category: | + | [[Category: Li, J]] |
[[Category: Ye, W]] | [[Category: Ye, W]] | ||
| + | [[Category: Membrane protein]] | ||
| + | [[Category: Scramblase]] | ||
| + | [[Category: Tmem16f]] | ||
Revision as of 06:24, 24 July 2019
Cryo-EM structure of TMEM16F in digitonin with calcium bound
| |||||||||||
Categories: Large Structures | Cheng, T | Cheng, Y | Dang, S | Feng, S | Han, T W | Jan, L Y | Jan, Y N | Jin, P | Li, J | Ye, W | Membrane protein | Scramblase | Tmem16f
